comparison bandage_info.xml @ 6:b9e31c5c01c7 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit fd23651fa43e8eefb7f55032c9ea645083042455"

5:d8b1027d6ce0

<tool id="bandage_info" name="Bandage Info" version="@TOOL_VERSION@+galaxy2" profile="18.01">
    <description>determine statistics of de novo assembly graphs</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"/>
    <expand macro="version_command"/>
    <command detect_errors="exit_code">
    <![CDATA[
@HEADLESS@

        <data name="outfile" format="tabular" from_work_dir="out.tab" label="${tool.name} on ${on_string}: Assembly Graph Information"/>
    </outputs>
    <tests>
        <test>
            <param name="input_file" ftype="tabular" value="gfa.tabular"/>
            <param name="select_mode" value="info"/>
            <param name="tsv" value="True"/>
            <output name="outfile" ftype="tabular" file="out.tab" compare="contains"/>
        </test>
        <test>
            <param name="input_file" ftype="tabular" value="gfa.tabular"/>
            <param name="select_mode" value="info"/>
            <output name="outfile" ftype="tabular" file="out_standard.tab"/>
        </test>
    </tests>
    <help><![CDATA[

6:b9e31c5c01c7

<tool id="bandage_info" name="Bandage Info" version="@TOOL_VERSION@+galaxy2" profile="18.01">
    <description>determine statistics of de novo assembly graphs</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"/>
    <expand macro="version_command"/>
    <command detect_errors="exit_code">
    <![CDATA[
@HEADLESS@

        <data name="outfile" format="tabular" from_work_dir="out.tab" label="${tool.name} on ${on_string}: Assembly Graph Information"/>
    </outputs>
    <tests>
        <test>
            <param name="input_file" ftype="tabular" value="gfa.tabular"/>
            <param name="tsv" value="True"/>
            <output name="outfile" ftype="tabular" file="out.tab" compare="contains"/>
        </test>
        <test>
            <param name="input_file" ftype="tabular" value="gfa.tabular"/>
            <output name="outfile" ftype="tabular" file="out_standard.tab"/>
        </test>
    </tests>
    <help><![CDATA[