comparison baredsc_combine_1d.xml @ 1:050cf43887d3 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/baredsc commit 576069ce2296ef58daa8a4e03c993d5900608c4c

0:c32347702e12

            <expand macro="macro_advanced_common_axis" axis="x"/>
            <expand macro="macro_advanced_evidence"/>
        </section>
    </inputs>
    <outputs>
        <data format="tabular" name="pdf" label="${tool.name} on $getVar('input_counts.input', 'input_counts.inputAnnData') for ${geneColName}: PDF with error bar" from_work_dir="output/baredSC_pdf.txt">
            <actions>
                <action name="column_names" type="metadata" default="x,low,mean,high,median" />
            </actions>
        </data>
        <data format="png" name="plot" label="${tool.name} on $getVar('input_counts.input', 'input_counts.inputAnnData') for ${geneColName}: plot" from_work_dir="baredSC">
            <change_format>
                <when input="plots.image_file_format" value="png" format="png" />
                <when input="plots.image_file_format" value="svg" format="svg" />
                <when input="plots.image_file_format" value="pdf" format="pdf" />
            </change_format>
        </data>
        <collection type="list" name="other_outputs" label="${tool.name} on $getVar('input_counts.input', 'input_counts.inputAnnData') for ${geneColName}: plots and txt">
            <discover_datasets pattern="baredSC_(?P&lt;identifier_0&gt;\S+)\.(?P&lt;ext&gt;.*)"/>
        </collection>
    </outputs>
    <tests>
        <!-- First test -->

1:050cf43887d3

            <expand macro="macro_advanced_common_axis" axis="x"/>
            <expand macro="macro_advanced_evidence"/>
        </section>
    </inputs>
    <outputs>
        <data format="tabular" name="pdf" label="${tool.name} on $getVar('input_counts.input', $getVar('input_counts.inputAnnData', 'shouldNeverHappen')).element_identifier for ${geneColName}: PDF with error bar" from_work_dir="output/baredSC_pdf.txt">
            <actions>
                <action name="column_names" type="metadata" default="x,low,mean,high,median" />
            </actions>
        </data>
        <data format="png" name="plot" label="${tool.name} on $getVar('input_counts.input', $getVar('input_counts.inputAnnData', 'shouldNeverHappen')).element_identifier for ${geneColName}: plot" from_work_dir="baredSC">
            <change_format>
                <when input="plots.image_file_format" value="png" format="png" />
                <when input="plots.image_file_format" value="svg" format="svg" />
                <when input="plots.image_file_format" value="pdf" format="pdf" />
            </change_format>
        </data>
        <collection type="list" name="other_outputs" label="${tool.name} on $getVar('input_counts.input', $getVar('input_counts.inputAnnData', 'shouldNeverHappen')).element_identifier for ${geneColName}: plots and txt">
            <discover_datasets pattern="baredSC_(?P&lt;identifier_0&gt;\S+)\.(?P&lt;ext&gt;.*)"/>
        </collection>
    </outputs>
    <tests>
        <!-- First test -->