Mercurial > repos > iuc > basil
annotate test-data/basil.vcf @ 0:e6ef29001647 draft
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author | iuc |
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date | Thu, 30 May 2019 21:14:58 -0400 |
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e6ef29001647
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1 ##fileformat=VCFv4.1 |
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2 ##source=BASIL |
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3 ##reference=ref.fa |
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4 ##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation"> |
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5 ##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant"> |
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6 ##INFO=<ID=OEA_ONLY,Number=0,Type=Flag,Description="Breakpoint support by OEA signature only"> |
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7 ##ALT=<ID=INS,Description="Insertion of novel sequence"> |
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8 ##FORMAT=<ID=GSCORE,Number=1,Type=String,Description="Sum of Geometric score means (see BASIL documentation)"> |
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9 ##FORMAT=<ID=CLEFT,Number=1,Type=String,Description="Clipped alignments supporting call from left side."> |
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10 ##FORMAT=<ID=CRIGHT,Number=1,Type=String,Description="Clipped alignments supporting call from right side."> |
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11 ##FORMAT=<ID=OEALEFT,Number=1,Type=String,Description="One-end anchored alignments supporting call from left side."> |
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12 ##FORMAT=<ID=OEARIGHT,Number=1,Type=String,Description="One-end anchored alignments supporting call from right side."> |
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13 ##contig=<ID=1,length=10000> |
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14 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT individual |
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15 1 5001 site_0 T <INS> . PASS IMPRECISE;SVTYPE=INS GSCORE:CLEFT:CRIGHT:OEALEFT:OEARIGHT 46.4256:10:12:35:32 |