Mercurial > repos > iuc > bcftools_annotate

annotate test-data/concat.3.c.vcf @ 4:7b10a015526e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 3edcac645f34d5a94884dedaf95c5774f4afc5c7
author iuc
date Sat, 11 Mar 2017 17:57:17 -0500
parents e58e34d48868
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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1 ##fileformat=VCFv4.0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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6 ##FILTER=<ID=q10,Description="Quality below 10">
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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7 ##contig=<ID=2,length=62435964>
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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9 2 280 . T A 246 PASS DP=10 GT 1|0 0|1
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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10 2 290 . T A 246 PASS DP=10 GT 1|0 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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11 2 300 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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12 2 310 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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13 2 320 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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14 2 330 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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15 2 340 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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16 2 350 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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17 2 360 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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18 2 370 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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19 2 380 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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20 2 390 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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21 2 400 . T A 246 PASS DP=10 GT 0|1 1|0
e58e34d48868 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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22 2 410 . T A 246 PASS DP=10 GT 0|1 1|0