Mercurial > repos > iuc > bcftools_concat
comparison bcftools_concat.xml @ 5:40174941cbda draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
author | iuc |
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date | Thu, 13 Apr 2017 17:44:25 -0400 |
parents | 3b318cfab085 |
children | 2d95ed0b720a |
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4:3b318cfab085 | 5:40174941cbda |
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8 <expand macro="requirements" /> | 8 <expand macro="requirements" /> |
9 <expand macro="version_command" /> | 9 <expand macro="version_command" /> |
10 <command detect_errors="aggressive"><![CDATA[ | 10 <command detect_errors="aggressive"><![CDATA[ |
11 @PREPARE_ENV@ | 11 @PREPARE_ENV@ |
12 @PREPARE_INPUT_FILES@ | 12 @PREPARE_INPUT_FILES@ |
13 #set $section = $sec_restrict | |
14 @PREPARE_REGIONS_FILE@ | |
15 | |
13 bcftools @EXECUTABLE@ | 16 bcftools @EXECUTABLE@ |
14 | 17 |
15 ## Default section | 18 ## Default section |
16 #set $section = $sec_default | 19 #set $section = $sec_default |
17 | 20 |
33 @OUTPUT_TYPE@ | 36 @OUTPUT_TYPE@ |
34 @THREADS@ | 37 @THREADS@ |
35 | 38 |
36 ## Primary Input/Outputs | 39 ## Primary Input/Outputs |
37 @INPUT_FILES@ | 40 @INPUT_FILES@ |
38 > "$output_file" | 41 > '$output_file' |
39 ]]> | 42 ]]> |
40 </command> | 43 </command> |
41 <inputs> | 44 <inputs> |
42 <expand macro="macro_inputs" /> | 45 <expand macro="macro_inputs" /> |
43 <section name="sec_restrict" expanded="false" title="Restrict to"> | 46 <section name="sec_restrict" expanded="false" title="Restrict to"> |