Mercurial > repos > iuc > bcftools_consensus
annotate test-data/concat.3.f.vcf @ 10:f867422772d6 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 851f81495c875ac09d936537ffd2b32e6af2c8c5"
author | iuc |
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date | Thu, 17 Oct 2019 02:49:33 -0400 |
parents | 74b27d899b85 |
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rev | line source |
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0
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
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1 ##fileformat=VCFv4.0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
6 ##FILTER=<ID=q10,Description="Quality below 10"> |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
7 ##contig=<ID=3,length=62435964> |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
9 3 380 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
10 3 390 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
11 3 400 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
12 3 410 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
13 3 420 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
14 3 430 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
15 3 440 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
16 3 450 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
17 3 460 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
18 3 470 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
19 3 480 . T A 246 PASS DP=10 GT 1|0 1|0 |
74b27d899b85
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
20 3 490 . T A 246 PASS DP=10 GT 1|0 1|0 |