comparison macros.xml @ 23:8aa352093d73 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 784611c9caf2680d41414ca2880b93a69d719701

22:da0bf365652d

<macros>
  <token name="@TOOL_VERSION@">1.15.1</token>
  <token name="@VERSION_SUFFIX@">3</token>
  <token name="@PROFILE@">20.01</token>
  <xml name="bio_tools">
      <xrefs>
          <xref type="bio.tools">bcftools</xref>
      </xrefs>

  #if $section.targets.targets_src == 'targets_file':
    #set $targets_path = 'targets_file.tab.gz'
    bgzip -c "$section.targets.targets_file" > $targets_path &&
    tabix -s 1 -b 2 -e 2 $targets_path &&
  #end if
#elif $tgts_sec.targets_file:
  #set $targets_path = 'targets_file.tab.gz'
  bgzip -c "$section.targets_file" > $targets_path &&
  tabix -s 1 -b 2 -e 2 $targets_path &&
#end if
]]>

23:8aa352093d73

<macros>
  <token name="@TOOL_VERSION@">1.15.1</token>
  <token name="@VERSION_SUFFIX@">4</token>
  <token name="@PROFILE@">20.01</token>
  <xml name="bio_tools">
      <xrefs>
          <xref type="bio.tools">bcftools</xref>
      </xrefs>

  #if $section.targets.targets_src == 'targets_file':
    #set $targets_path = 'targets_file.tab.gz'
    bgzip -c "$section.targets.targets_file" > $targets_path &&
    tabix -s 1 -b 2 -e 2 $targets_path &&
  #end if
#elif $section.targets_file:
  #set $targets_path = 'targets_file.tab.gz'
  bgzip -c "$section.targets_file" > $targets_path &&
  tabix -s 1 -b 2 -e 2 $targets_path &&
#end if
]]>