Mercurial > repos > iuc > bcftools_convert_from_vcf
annotate test-data/filter.4.vcf @ 11:7ca6120cb2a4 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 8f3fe2272c80fdb749db49be689681e4d1391bee"
author | iuc |
---|---|
date | Wed, 25 Dec 2019 12:29:50 -0500 |
parents | 16f221807ecd |
children |
rev | line source |
---|---|
0
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
1 ##fileformat=VCFv4.1 |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
2 ##contig=<ID=chr1,length=135006516> |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
3 ##INFO=<ID=TEST1,Number=1,Type=Integer,Description="Test1"> |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
4 ##INFO=<ID=TEST2,Number=1,Type=Float,Description="Test2"> |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
5 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
6 ##FORMAT=<ID=TEST3,Number=1,Type=Integer,Description="Test3"> |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
7 ##FORMAT=<ID=TEST4,Number=1,Type=Float,Description="Test4"> |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample1 sample2 |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
9 chr1 1 . A T 100 . TEST1=10;TEST2=10 GT:TEST3:TEST4 0/1:10:10 0/1:30:30 |
16f221807ecd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
10 chr1 2 . A T 100 . TEST1=50;TEST2=50 GT:TEST3:TEST4 0/1:20:20 0/1:40:40 |