Mercurial > repos > iuc > bcftools_convert_from_vcf

view test-data/concat.3.f.vcf @ 6:92c0aff8b53e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 880627162bdeb854582e9f58ddab451de35feba3
author iuc
date Tue, 12 Dec 2017 14:04:15 -0500
parents 16f221807ecd
children
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##fileformat=VCFv4.0
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FILTER=<ID=q10,Description="Quality below 10">
##contig=<ID=3,length=62435964>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A	B
3	380	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	390	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	400	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	410	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	420	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	430	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	440	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	450	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	460	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	470	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	480	.	T	A	246	PASS	DP=10	GT	1|0	1|0
3	490	.	T	A	246	PASS	DP=10	GT	1|0	1|0