Mercurial > repos > iuc > bcftools_convert_from_vcf
view test-data/annots2.vcf @ 3:941a08cd0e6d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9df9b52baf62b70fbcfc3fbe965d7197d4e8738e
| author | iuc |
|---|---|
| date | Tue, 31 Jan 2017 12:42:16 -0500 |
| parents | 16f221807ecd |
| children |
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##fileformat=VCFv4.1 ##FILTER=<ID=q99,Description="Quality below 10"> ##contig=<ID=1,assembly=b37,length=249250621> ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta ##INFO=<ID=FLAG,Number=0,Type=Flag,Description="Test type"> ##INFO=<ID=IINT,Number=.,Type=Integer,Description="Test type"> ##INFO=<ID=IFLT,Number=.,Type=Float,Description="Test type"> ##INFO=<ID=ISTR,Number=.,Type=String,Description="Test type"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> ##FORMAT=<ID=FINT,Number=.,Type=Integer,Description="Test type"> ##FORMAT=<ID=FFLT,Number=.,Type=Float,Description="Test type"> ##FORMAT=<ID=FSTR,Number=.,Type=String,Description="Test type"> #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT B A 1 3000001 . C T . . . GT . . 1 3000002 id C T 99 q99 FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999 GT:FINT:FFLT:FSTR 1|1:88,99:8.8,9.9:888,999 0|1:77:7.7:77 1 3000003 id C T 99 q99 FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999 GT:FINT:FFLT:FSTR 1|1:88,99:8.8,9.9:888,999 0|1:77:7.7:77 1 3000004 id C T 99 q99 FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999 GT:FINT:FFLT:FSTR 1|1:88,99:8.8,9.9:888,999 0|1:77:7.7:77