Mercurial > repos > iuc > bcftools_convert_to_vcf
comparison macros.xml @ 12:fec517907949 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 8ad854180e3be0934cdb1f0021886199a2edf9c3"
author | iuc |
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date | Fri, 05 Feb 2021 19:44:38 +0000 |
parents | 8bb5efd7a3dd |
children | c14b33ab15d8 |
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11:8bb5efd7a3dd | 12:fec517907949 |
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434 #if $section.sample: | 434 #if $section.sample: |
435 --sample '${section.sample}' | 435 --sample '${section.sample}' |
436 #end if | 436 #end if |
437 </token> | 437 </token> |
438 | 438 |
439 <xml name="macro_include_exclude_validate_sanitize"> | |
440 <validator type="expression" message="Single quote or trailing backslash not allowed">"'" not in value and value[-1] != "\\"</validator> | |
441 <sanitizer> | |
442 <valid initial="string.ascii_letters,string.digits,string.whitespace,string.punctuation"> | |
443 <remove value="@" /> | |
444 <remove value="'" /> | |
445 </valid> | |
446 </sanitizer> | |
447 </xml> | |
439 | 448 |
440 <xml name="macro_include"> | 449 <xml name="macro_include"> |
441 <param argument="--include" type="text" optional="true" label="Include" help="Select sites for which the expression is true"> | 450 <param argument="--include" type="text" optional="true" label="Include" help="Select sites for which the expression is true"> |
442 <validator type="regex" message="Single quote not allowed">^[^']*$</validator> | 451 <expand macro="macro_include_exclude_validate_sanitize" /> |
443 <sanitizer sanitize="False"/> | |
444 </param> | 452 </param> |
445 </xml> | 453 </xml> |
446 <token name="@INCLUDE@"> | 454 <token name="@INCLUDE@"> |
447 #if $section.include: | 455 #if $section.include: |
448 --include '${section.include}' | 456 --include '${section.include}' |
449 #end if | 457 #end if |
450 </token> | 458 </token> |
451 | 459 |
452 <xml name="macro_exclude"> | 460 <xml name="macro_exclude"> |
453 <param argument="--exclude" type="text" optional="true" label="Exclude" help="Exclude sites for which the expression is true"> | 461 <param argument="--exclude" type="text" optional="true" label="Exclude" help="Exclude sites for which the expression is true"> |
454 <validator type="regex" message="Single quote not allowed">^[^']*$</validator> | 462 <expand macro="macro_include_exclude_validate_sanitize" /> |
455 <sanitizer sanitize="False"/> | |
456 </param> | 463 </param> |
457 </xml> | 464 </xml> |
458 <token name="@EXCLUDE@"> | 465 <token name="@EXCLUDE@"> |
459 #if $section.exclude: | 466 #if $section.exclude: |
460 --exclude '${section.exclude}' | 467 --exclude '${section.exclude}' |