Mercurial > repos > iuc > bcftools_merge
comparison bcftools_merge.xml @ 5:c5c61f2f8757 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
| author | iuc |
|---|---|
| date | Thu, 13 Apr 2017 17:47:48 -0400 |
| parents | df40d7f9737c |
| children | 7ba36babba2d |
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| 4:df40d7f9737c | 5:c5c61f2f8757 |
|---|---|
| 8 <expand macro="requirements" /> | 8 <expand macro="requirements" /> |
| 9 <expand macro="version_command" /> | 9 <expand macro="version_command" /> |
| 10 <command detect_errors="aggressive"><![CDATA[ | 10 <command detect_errors="aggressive"><![CDATA[ |
| 11 @PREPARE_ENV@ | 11 @PREPARE_ENV@ |
| 12 @PREPARE_INPUT_FILES@ | 12 @PREPARE_INPUT_FILES@ |
| 13 #set $section = $sec_restrict | |
| 14 @PREPARE_REGIONS_FILE@ | |
| 15 | |
| 13 bcftools @EXECUTABLE@ | 16 bcftools @EXECUTABLE@ |
| 14 | 17 |
| 15 ## Header section | 18 ## Header section |
| 16 #set $section = $sec_header | 19 #set $section = $sec_header |
| 17 ${section.print_header} | 20 ${section.print_header} |
| 38 @OUTPUT_TYPE@ | 41 @OUTPUT_TYPE@ |
| 39 @THREADS@ | 42 @THREADS@ |
| 40 | 43 |
| 41 ## Primary Input/Outputs | 44 ## Primary Input/Outputs |
| 42 @INPUT_FILES@ | 45 @INPUT_FILES@ |
| 43 > "$output_file" | 46 > '$output_file' |
| 44 ]]> | 47 ]]> |
| 45 </command> | 48 </command> |
| 46 <inputs> | 49 <inputs> |
| 47 <expand macro="macro_inputs" /> | 50 <expand macro="macro_inputs" /> |
| 48 <section name="sec_restrict" expanded="false" title="Restrict to"> | 51 <section name="sec_restrict" expanded="false" title="Restrict to"> |