Mercurial > repos > iuc > bcftools_mpileup

annotate test-data/stats.a.vcf @ 12:31ea13dfe5e6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 407e1d8f4dd1a60623783331926098f7f5624841
author iuc
date Fri, 19 Aug 2022 19:51:22 +0000
parents 256e65e460b7
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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12f7c5315f7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
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1 ##fileformat=VCFv4.2
12f7c5315f7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
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diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
12f7c5315f7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
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3 ##contig=<ID=1,assembly=b37,length=249250621>
12f7c5315f7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
12f7c5315f7f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C
4
256e65e460b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5
iuc
parents: 0
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6 1 1000 . G A . PASS . GT 0|0 0|1 1|1
256e65e460b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5
iuc
parents: 0
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7 1 1001 . G A . PASS . GT 0/0 0|1 1|1
256e65e460b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5
iuc
parents: 0
diff changeset
8 1 1002 . G A . PASS . GT 0|0 0|1 1|1