Mercurial > repos > iuc > bcftools_mpileup
view test-data/annotate2.vcf @ 4:256e65e460b7 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5
| author | iuc |
|---|---|
| date | Wed, 05 Jun 2019 13:18:11 -0400 |
| parents | 12f7c5315f7f |
| children |
line wrap: on
line source
##fileformat=VCFv4.1 ##contig=<ID=1,assembly=b37,length=249250621> ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta ##INFO=<ID=FLAG,Number=0,Type=Flag,Description="Test type"> ##INFO=<ID=IINT,Number=1,Type=Integer,Description="Test type"> ##INFO=<ID=IFLT,Number=1,Type=Float,Description="Test type"> ##INFO=<ID=ISTR,Number=1,Type=String,Description="Test type"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> ##FORMAT=<ID=FINT,Number=1,Type=Integer,Description="Test type"> ##FORMAT=<ID=FFLT,Number=1,Type=Float,Description="Test type"> ##FORMAT=<ID=FSTR,Number=1,Type=String,Description="Test type"> ##FILTER=<ID=q11,Description="Quality below 10"> #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C 1 3000001 xx C T 11 PASS FLAG;IINT=11;IFLT=1.1;ISTR=xxx GT:FINT:FFLT:FSTR 0/0:11:1.1:xxx 0/0:11:1.1:x 0/0:11:1.1:x 1 3000002 . C T . . . GT . . . 1 3000003 xx C T 11 q11 FLAG;IINT=.;IFLT=.;ISTR=. GT:FINT:FFLT:FSTR 0/0:.:.:. 0/0:.:.:. 0/0:.:.:. 1 3000004 xx C T 11 q11 FLAG;IINT=11;IFLT=1.1;ISTR=xxx GT:FINT:FFLT:FSTR 0/0:11:1.1:x 0/0:11:1.1:xxx 0/0:11:1.1:xxx