Mercurial > repos > iuc > bcftools_plugin_dosage
comparison bcftools_plugin_dosage.xml @ 8:67bb9fcc0d96 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5
| author | iuc |
|---|---|
| date | Wed, 05 Jun 2019 13:03:53 -0400 |
| parents | d31a2e310a52 |
| children | 2ee1392161a6 |
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| 7:d31a2e310a52 | 8:67bb9fcc0d96 |
|---|---|
| 1 <?xml version='1.0' encoding='utf-8'?> | 1 <?xml version='1.0' encoding='utf-8'?> |
| 2 <tool name="bcftools @EXECUTABLE@" id="bcftools_plugin_@PLUGIN_ID@" version="@TOOL_VERSION@"> | 2 <tool name="bcftools @EXECUTABLE@" id="bcftools_plugin_@PLUGIN_ID@" version="@TOOL_VERSION@+galaxy1"> |
| 3 <description>plugin genotype dosage</description> | 3 <description>plugin genotype dosage</description> |
| 4 <macros> | 4 <macros> |
| 5 <token name="@EXECUTABLE@">dosage</token> | 5 <token name="@EXECUTABLE@">dosage</token> |
| 6 <token name="@PLUGIN_ID@">dosage</token> | 6 <token name="@PLUGIN_ID@">dosage</token> |
| 7 <import>macros.xml</import> | 7 <import>macros.xml</import> |
| 37 ]]> | 37 ]]> |
| 38 </command> | 38 </command> |
| 39 <inputs> | 39 <inputs> |
| 40 <expand macro="macro_input" /> | 40 <expand macro="macro_input" /> |
| 41 <section name="sec_restrict" expanded="false" title="Restrict to"> | 41 <section name="sec_restrict" expanded="false" title="Restrict to"> |
| 42 <expand macro="macro_regions" /> | 42 <expand macro="macro_restrict" /> |
| 43 <expand macro="macro_targets" /> | 43 <expand macro="macro_restrict" type="target" label_type="Target" /> |
| 44 <expand macro="macro_include" /> | 44 <expand macro="macro_include" /> |
| 45 <expand macro="macro_exclude" /> | 45 <expand macro="macro_exclude" /> |
| 46 </section> | 46 </section> |
| 47 <section name="sec_plugin" expanded="true" title="Plugin Options"> | 47 <section name="sec_plugin" expanded="true" title="Plugin Options"> |
| 48 <param name="tags" type="text" value="" optional="true" label="VCF tag to determine the dosage from [PL,GL,GT]"> | 48 <param name="tags" type="text" value="" optional="true" label="VCF tag to determine the dosage from [PL,GL,GT]"> |