# HG changeset patch
# User iuc
# Date 1513105563 18000
# Node ID 0a62420cb9cd3345ee7b805f7167fcad14ccf732
# Parent  8e1fbf8baef9184e7f6ec9aafc61049382b15d6e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 880627162bdeb854582e9f58ddab451de35feba3

diff -r 8e1fbf8baef9 -r 0a62420cb9cd macros.xml
--- a/macros.xml	Thu Apr 13 17:48:00 2017 -0400
+++ b/macros.xml	Tue Dec 12 14:06:03 2017 -0500
@@ -49,7 +49,7 @@
   bgzip -c '$input_file' > $input_vcf &&
   bcftools index $input_vcf &&
 #elif $input_file.is_of_type('vcf_bgzip')
-  ln -s '$input_file' $input_vcf
+  ln -s '$input_file' $input_vcf &&
 #elif $input_file.is_of_type('bcf')
   #set $input_vcf = 'input.bcf'
   ln -s '$input_file' $input_vcf &&
@@ -59,7 +59,7 @@
     bcftools index $input_vcf &&
   #end if
 #elif $input_file.is_of_type('bcf_bgzip')
-  ln -s '$input_file' $input_vcf
+  ln -s '$input_file' $input_vcf &&
 #end if
 ]]>
   </token>