Mercurial > repos > iuc > bcftools_plugin_fixploidy

diff bcftools_plugin_fixploidy.xml @ 5:aec8cc772e0c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
author iuc
date Thu, 13 Apr 2017 17:45:30 -0400
parents b7dc6f8084ce
children 12152af85697
line wrap: on
line diff
--- a/bcftools_plugin_fixploidy.xml	Sat Mar 11 18:01:42 2017 -0500
+++ b/bcftools_plugin_fixploidy.xml	Thu Apr 13 17:45:30 2017 -0400
@@ -13,6 +13,7 @@
 @PREPARE_INPUT_FILE@
 #set $section = $sec_restrict
 @PREPARE_TARGETS_FILE@
+@PREPARE_REGIONS_FILE@
 
 bcftools plugin @EXECUTABLE@
 
@@ -38,7 +39,7 @@
 #end if
 ## Only default tag GT is currently accepted  
 --tags "$section.tags"  
-> "$output_file"
+> '$output_file'
 ]]>
     </command>
     <inputs>