Mercurial > repos > iuc > bcftools_plugin_impute_info

view test-data/annots2.vcf @ 4:c6071203aaa0 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 3edcac645f34d5a94884dedaf95c5774f4afc5c7
author iuc
date Sat, 11 Mar 2017 18:02:08 -0500
parents 981086ab0e3d
children
line wrap: on
line source

##fileformat=VCFv4.1
##FILTER=<ID=q99,Description="Quality below 10">
##contig=<ID=1,assembly=b37,length=249250621>
##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
##INFO=<ID=FLAG,Number=0,Type=Flag,Description="Test type">
##INFO=<ID=IINT,Number=.,Type=Integer,Description="Test type">
##INFO=<ID=IFLT,Number=.,Type=Float,Description="Test type">
##INFO=<ID=ISTR,Number=.,Type=String,Description="Test type">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=FINT,Number=.,Type=Integer,Description="Test type">
##FORMAT=<ID=FFLT,Number=.,Type=Float,Description="Test type">
##FORMAT=<ID=FSTR,Number=.,Type=String,Description="Test type">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	B	A
1	3000001	.	C	T	.	.	.	GT	.	.
1	3000002	id	C	T	99	q99	FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999	GT:FINT:FFLT:FSTR	1|1:88,99:8.8,9.9:888,999	0|1:77:7.7:77
1	3000003	id	C	T	99	q99	FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999	GT:FINT:FFLT:FSTR	1|1:88,99:8.8,9.9:888,999	0|1:77:7.7:77
1	3000004	id	C	T	99	q99	FLAG;IINT=88,99;IFLT=8.8,9.9;ISTR=888,999	GT:FINT:FFLT:FSTR	1|1:88,99:8.8,9.9:888,999	0|1:77:7.7:77