Mercurial > repos > iuc > bcftools_plugin_missing2ref
diff test-data/annots4.vcf @ 0:5e9cf5308e97 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
| author | iuc |
|---|---|
| date | Wed, 06 Jul 2016 07:07:16 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/annots4.vcf Wed Jul 06 07:07:16 2016 -0400 @@ -0,0 +1,13 @@ +##fileformat=VCFv4.2 +##INFO=<ID=FA,Number=A,Type=Float,Description="test"> +##INFO=<ID=FR,Number=R,Type=Float,Description="test"> +##INFO=<ID=IA,Number=A,Type=Integer,Description="test"> +##INFO=<ID=IR,Number=R,Type=Integer,Description="test"> +##INFO=<ID=SA,Number=A,Type=String,Description="test"> +##INFO=<ID=SR,Number=R,Type=String,Description="test"> +##contig=<ID=1,assembly=b37,length=249250621> +##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta +#CHROM POS ID REF ALT QUAL FILTER INFO +1 1 . C A,T,G . . FA=0,1.1,0;FR=1.1,0,2.2,0;IA=0,1,0;IR=1,0,2,0;SA=X,11,XXX;SR=1,XX,222,XXX +1 2 . C T,G . . FA=1.1,2.2;FR=1.1,2.2,3.3;IA=1,2;IR=1,2,3;SA=11,2;SR=111,22,3 +1 3 . C T . . FA=1.1;FR=1.1,2.2;IA=1;IR=1,2;SA=11;SR=11,2