Mercurial > repos > iuc > bcftools_plugin_missing2ref

view test-data/annots4.vcf @ 10:e09707e8607b draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 851f81495c875ac09d936537ffd2b32e6af2c8c5"
author iuc
date Thu, 17 Oct 2019 02:43:42 -0400
parents 5e9cf5308e97
children
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##fileformat=VCFv4.2
##INFO=<ID=FA,Number=A,Type=Float,Description="test">
##INFO=<ID=FR,Number=R,Type=Float,Description="test">
##INFO=<ID=IA,Number=A,Type=Integer,Description="test">
##INFO=<ID=IR,Number=R,Type=Integer,Description="test">
##INFO=<ID=SA,Number=A,Type=String,Description="test">
##INFO=<ID=SR,Number=R,Type=String,Description="test">
##contig=<ID=1,assembly=b37,length=249250621>
##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
1	1	.	C	A,T,G	.	.	FA=0,1.1,0;FR=1.1,0,2.2,0;IA=0,1,0;IR=1,0,2,0;SA=X,11,XXX;SR=1,XX,222,XXX
1	2	.	C	T,G	.	.	FA=1.1,2.2;FR=1.1,2.2,3.3;IA=1,2;IR=1,2,3;SA=11,2;SR=111,22,3
1	3	.	C	T	.	.	FA=1.1;FR=1.1,2.2;IA=1;IR=1,2;SA=11;SR=11,2