Mercurial > repos > iuc > bcftools_plugin_vcf2sex
view test-data/query.filter.vcf @ 2:fd7f15e886a2 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 44bebb8a97d64015cbba59f0663e2541035112b6
author | iuc |
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date | Mon, 03 Oct 2016 12:17:12 -0400 |
parents | 5e036e905f69 |
children |
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##fileformat=VCFv4.1 ##INFO=<ID=TEST,Number=1,Type=Integer,Description="Testing Tag"> ##FORMAT=<ID=TT,Number=A,Type=Integer,Description="Testing Tag, with commas and \"escapes\" and escaped escapes combined with \\\"quotes\\\\\""> ##INFO=<ID=DP4,Number=4,Type=Integer,Description="# high-quality ref-forward bases, ref-reverse, alt-forward and alt-reverse bases"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> ##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype Likelihood"> ##FILTER=<ID=q10,Description="Quality below 10"> ##FILTER=<ID=test,Description="Testing filter"> ##contig=<ID=1,assembly=b37,length=249250621> ##contig=<ID=2,assembly=b37,length=249250621> ##contig=<ID=3,assembly=b37,length=198022430> ##contig=<ID=4,assembly=b37,length=191154276> ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B 1 3000150 . C T 59.2 PASS . GT 0 0 1 3000151 . C T 59.2 PASS . GT 1 0 1 3000152 . C T 59.2 PASS . GT 0 1 1 3000153 . C T 59.2 PASS . GT 1 1