Mercurial > repos > iuc > bcftools_view
changeset 21:abc3ced31cd1 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 96c0663be587b73bdf09ddf060cb559f28f9eba7
| author | iuc |
|---|---|
| date | Thu, 12 Jan 2023 15:37:29 +0000 |
| parents | 59fa8742285e |
| children | |
| files | bcftools_view.xml macros.xml |
| diffstat | 2 files changed, 20 insertions(+), 10 deletions(-) [+] |
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--- a/bcftools_view.xml Thu Sep 29 08:49:13 2022 +0000 +++ b/bcftools_view.xml Thu Jan 12 15:37:29 2023 +0000 @@ -244,13 +244,15 @@ <param name="known_or_novel" value="--novel" /> <param name="private" value="--exclude-private" /> <param name="samples" value="NA00003" /> - <conditional name="regions"> - <param name="regions_src" value="regions"/> - <repeat name="regions"> - <param name="chrom" value="Y" /> - <param name="start" value="20" /> - </repeat> - </conditional> + <section name="sec_restrict"> + <conditional name="regions"> + <param name="regions_src" value="regions"/> + <repeat name="regions"> + <param name="chrom" value="Y" /> + <param name="start" value="20" /> + </repeat> + </conditional> + </section> <param name="output_type" value="v" /> <output name="output_file"> <assert_contents> @@ -268,11 +270,19 @@ <param name="private" value="--exclude-private" /> <param name="apply_filters" value="PASS" /> <param name="samples" value="NA00003" /> - <param name="regions" value="20,Y" /> + <section name="sec_restrict"> + <conditional name="regions"> + <param name="regions_src" value="regions"/> + <repeat name="regions"> + <param name="chrom" value="Y" /> + <param name="start" value="20" /> + </repeat> + </conditional> + </section> <param name="output_type" value="v" /> <output name="output_file"> <assert_contents> - <has_text text="rs6111385" /> + <has_text text="Minimum number of alternate bases" /> <not_has_text text="8657215" /> </assert_contents> </output>
--- a/macros.xml Thu Sep 29 08:49:13 2022 +0000 +++ b/macros.xml Thu Jan 12 15:37:29 2023 +0000 @@ -1,6 +1,6 @@ <macros> <token name="@TOOL_VERSION@">1.15.1</token> - <token name="@VERSION_SUFFIX@">2</token> + <token name="@VERSION_SUFFIX@">3</token> <token name="@PROFILE@">20.01</token> <xml name="bio_tools"> <xrefs>