Mercurial > repos > iuc > beacon2_gene

diff gene.xml @ 1:9135f3e914b7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/beacon2-import commit 23f6d9e5e91c43d5ab68e604205e06785635f42f
author iuc
date Mon, 19 Aug 2024 10:54:54 +0000
parents 8e949a739eaa
children
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--- a/gene.xml	Mon Jul 22 12:36:40 2024 +0000
+++ b/gene.xml	Mon Aug 19 10:54:54 2024 +0000
@@ -50,12 +50,11 @@
     <tests>
         <test expect_num_outputs="1">
             <param name="database" value="beacon" />
-            <param name="collection" value="genomicVariations" />
+            <param name="collection" value="test" />
             <param name="db_host" value="20.108.51.167" />
-            <param name="geneId" value="OR4F5-LOC729737" />
-            <param name="alternateBases" value="A" />
-            <param name="variantType" value="SNP" />
-            <param name="aminoacidChange" value="." />
+            <param name="geneId" value="BRCA1" />
+            <param name="variantType" value="SNV" />
+            <param name="aminoacidChange" value="p.Val600Glu" />
             <output name="out_gene_query">
                 <assert_contents><has_text_matching expression="_id"/></assert_contents>
             </output>