Mercurial > repos > iuc > bedtools
annotate tool_data_table_conf.xml.test @ 44:589e7e57fd6d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 03a91f6c42c75dc36d09505c2e6a2236178e4695
author | iuc |
---|---|
date | Mon, 20 Feb 2023 21:49:48 +0000 |
parents | 07e8b80f278c |
children |
rev | line source |
---|---|
43
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
1 <tables> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
2 <!-- Locations of all sam indexes under genome directory --> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
3 <table name="fasta_indexes" comment_char="#"> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
4 <columns>value, dbkey, name, path</columns> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
5 <file path="${__HERE__}/test-data/fasta_indexes.loc" /> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
6 </table> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
7 <!-- Locations of all gff files with annotations of genome builds --> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
8 <table name="all_gff" comment_char="#"> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
9 <columns>value, dbkey, name, path</columns> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
10 <file path="${__HERE__}/test-data/all_gff.loc" /> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
11 </table> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
12 <!-- Locations of dbkeys and len files under genome directory --> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
13 <table name="__dbkeys__" comment_char="#"> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
14 <columns>value, name, len_path</columns> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
15 <file path="${__HERE__}/test-data/dbkeys.loc" /> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
16 </table> |
07e8b80f278c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
iuc
parents:
diff
changeset
|
17 </tables> |