Mercurial > repos > iuc > bedtools
comparison flankBed.xml @ 43:07e8b80f278c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
author | iuc |
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date | Fri, 01 Apr 2022 19:02:51 +0000 |
parents | 7ab85ac5f64b |
children | 64e2edfe7a2c |
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42:841fb4dc3ab3 | 43:07e8b80f278c |
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1 <tool id="bedtools_flankbed" name="bedtools FlankBed" version="@TOOL_VERSION@" profile="@PROFILE@"> | 1 <tool id="bedtools_flankbed" name="bedtools FlankBed" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> |
2 <description>create new intervals from the flanks of existing intervals</description> | 2 <description>create new intervals from the flanks of existing intervals</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="bio_tools" /> | 6 <expand macro="bio_tools" /> |
8 <expand macro="stdio" /> | 8 <expand macro="stdio" /> |
9 <command><![CDATA[ | 9 <command><![CDATA[ |
10 flankBed | 10 flankBed |
11 $pct | 11 $pct |
12 $strand | 12 $strand |
13 -g @GENOME_FILE@ | 13 @GENOME_FILE@ |
14 -i '$input' | 14 -i '$input' |
15 | 15 |
16 #if $addition.addition_select == 'b': | 16 #if $addition.addition_select == 'b': |
17 -b $addition.b | 17 -b $addition.b |
18 #else: | 18 #else: |