Mercurial > repos > iuc > bedtools
comparison getfastaBed.xml @ 41:7ab85ac5f64b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 500a03281ea704abc7a16d9af63d67dbdcc5cd0b"
| author | iuc |
|---|---|
| date | Thu, 04 Nov 2021 11:36:55 +0000 |
| parents | a68aa6c1204a |
| children | 841fb4dc3ab3 |
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| 40:a68aa6c1204a | 41:7ab85ac5f64b |
|---|---|
| 1 <tool id="bedtools_getfastabed" name="bedtools GetFastaBed" version="@TOOL_VERSION@" profile="@PROFILE@"> | 1 <tool id="bedtools_getfastabed" name="bedtools GetFastaBed" version="@TOOL_VERSION@" profile="@PROFILE@"> |
| 2 <description>use intervals to extract sequences from a FASTA file</description> | 2 <description>use intervals to extract sequences from a FASTA file</description> |
| 3 <expand macro="bio_tools" /> | |
| 4 <macros> | 3 <macros> |
| 5 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 6 </macros> | 5 </macros> |
| 6 <expand macro="bio_tools" /> | |
| 7 <expand macro="requirements" /> | 7 <expand macro="requirements" /> |
| 8 <expand macro="stdio" /> | 8 <expand macro="stdio" /> |
| 9 <command><![CDATA[ | 9 <command><![CDATA[ |
| 10 #if str($fasta_source.fasta_source_selector) == 'history': | 10 #if str($fasta_source.fasta_source_selector) == 'history': |
| 11 #set $fasta_file = $fasta_source.fasta | 11 #set $fasta_file = $fasta_source.fasta |