Mercurial > repos > iuc > bedtools
comparison jaccardBed.xml @ 26:95a3b2c25bd1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59
author | iuc |
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date | Thu, 26 Apr 2018 17:02:46 -0400 |
parents | 7308cc546a36 |
children | 4f7a5ccd2ae9 |
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25:e36671a0f646 | 26:95a3b2c25bd1 |
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16 -b '$inputB' | 16 -b '$inputB' |
17 > '$output' | 17 > '$output' |
18 ]]> | 18 ]]> |
19 </command> | 19 </command> |
20 <inputs> | 20 <inputs> |
21 <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/> | 21 <param format="@STD_BEDTOOLS_INPUTS@" name="inputA" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@ file"/> |
22 <param format="bed,vcf,gff,gff3" name="inputB" type="data" label="BED/VCF/GFF file"/> | 22 <param format="@STD_BEDTOOLS_INPUTS@" name="inputB" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@ file"/> |
23 <expand macro="overlap" /> | 23 <expand macro="overlap" /> |
24 <expand macro="reciprocal" /> | 24 <expand macro="reciprocal" /> |
25 <param name="strand" type="boolean" checked="false" truevalue="-s" falsevalue="" | 25 <param name="strand" type="boolean" checked="false" truevalue="-s" falsevalue="" |
26 label="Force strandedness" | 26 label="Force strandedness" |
27 help="That is, only report hits in B that overlap A on the same strand. By default, overlaps are reported without respect to strand. (-s)" /> | 27 help="That is, only report hits in B that overlap A on the same strand. By default, overlaps are reported without respect to strand. (-s)" /> |