comparison macros.xml @ 26:95a3b2c25bd1 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59

25:e36671a0f646

            <requirement type="package" version="2.27.0">bedtools</requirement>
            <yield/>
        </requirements>
    </xml>
    <token name="@WRAPPER_VERSION@">2.27.0</token>
    <xml name="stdio">
        <stdio>
            <!-- Anything other than zero is an error -->
            <exit_code range="1:" />
            <exit_code range=":-1" />

            help="This option requires -D and follows its orientation rules for determining what is 'downstream'. (-fd)" />
    </xml>
    <xml name="addition">
        <conditional name="addition">
            <param name="addition_select" type="select" label="Choose what you want to do">
                <option value="b" selected="True">Increase the BED/GFF/VCF entry by the same number base pairs in each direction.</option>
                <option value="lr">Increase by Start Coordinate and End Coordinate</option>
            </param>
            <when value="b">
                <param name="b" value="1" label="Number of base pairs" type="integer" />
            </when>

26:95a3b2c25bd1

            <requirement type="package" version="2.27.0">bedtools</requirement>
            <yield/>
        </requirements>
    </xml>
    <token name="@WRAPPER_VERSION@">2.27.0</token>
    <token name="@STD_BEDTOOLS_INPUTS@">bed,bedgraph,gff,vcf</token>
    <token name="@STD_BEDTOOLS_INPUT_LABEL@">bed,bedgraph,gff,vcf</token>
    <xml name="stdio">
        <stdio>
            <!-- Anything other than zero is an error -->
            <exit_code range="1:" />
            <exit_code range=":-1" />

            help="This option requires -D and follows its orientation rules for determining what is 'downstream'. (-fd)" />
    </xml>
    <xml name="addition">
        <conditional name="addition">
            <param name="addition_select" type="select" label="Choose what you want to do">
                <option value="b" selected="True">Increase the @STD_BEDTOOLS_INPUT_LABEL@ entry by the same number base pairs in each direction.</option>
                <option value="lr">Increase by Start Coordinate and End Coordinate</option>
            </param>
            <when value="b">
                <param name="b" value="1" label="Number of base pairs" type="integer" />
            </when>