Mercurial > repos > iuc > bedtools

comparison windowBed.xml @ 26:95a3b2c25bd1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59
author iuc
date Thu, 26 Apr 2018 17:02:46 -0400
parents fadebae7e69b
children 4f7a5ccd2ae9
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25:e36671a0f646 26:95a3b2c25bd1
28 $header 28 $header
29 > '$output' 29 > '$output'
30 ]]> 30 ]]>
31 </command> 31 </command>
32 <inputs> 32 <inputs>
33 <param format="bed,bam,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF/BAM file"/> 33 <param format="bam,@STD_BEDTOOLS_INPUTS@" name="inputA" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@/BAM file"/>
34 <param format="bed,gff,vcf,gff3" name="inputB" type="data" label="BED/VCF/GFF file"/> 34 <param format="@STD_BEDTOOLS_INPUTS@" name="inputB" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@ file"/>
35 <param name="bed" type="boolean" checked="false" truevalue="-bed" falsevalue="" 35 <param name="bed" type="boolean" checked="false" truevalue="-bed" falsevalue=""
36 label="When using BAM input, write output as BED. The default is to write output in BAM when using a bam file" 36 label="When using BAM input, write output as BED. The default is to write output in BAM when using a bam file"
37 help="(-bed)" /> 37 help="(-bed)" />
38 <conditional name="addition"> 38 <conditional name="addition">
39 <param name="addition_select" type="select" label="Choose what you want to do"> 39 <param name="addition_select" type="select" label="Choose what you want to do">