Mercurial > repos > iuc > bedtools
comparison maskFastaBed.xml @ 10:c78cf6fe3018 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 44bebb8a97d64015cbba59f0663e2541035112b6
| author | iuc |
|---|---|
| date | Mon, 03 Oct 2016 07:36:08 -0400 |
| parents | 607c0576c6ab |
| children | a8eabd2838f6 |
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| 9:2ab422b551df | 10:c78cf6fe3018 |
|---|---|
| 19 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/> | 19 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/> |
| 20 <param format="fasta" name="fasta" type="data" label="Fasta file"/> | 20 <param format="fasta" name="fasta" type="data" label="Fasta file"/> |
| 21 <param name="soft" type="boolean" checked="false" truevalue="-soft" falsevalue="" | 21 <param name="soft" type="boolean" checked="false" truevalue="-soft" falsevalue="" |
| 22 label="Soft-mask (that is, convert to lower-case bases) the FASTA sequence" | 22 label="Soft-mask (that is, convert to lower-case bases) the FASTA sequence" |
| 23 help="By default, hard-masking (that is, conversion to Ns) is performed. (-soft)" /> | 23 help="By default, hard-masking (that is, conversion to Ns) is performed. (-soft)" /> |
| 24 <param name="mc" type="text" value="N" length="1" | 24 <param name="mc" type="text" value="N" |
| 25 label="Replace masking character" | 25 label="Replace masking character" |
| 26 help="That is, instead of masking with Ns, use another character. (-mc)" /> | 26 help="That is, instead of masking with Ns, use another character. (-mc)" /> |
| 27 </inputs> | 27 </inputs> |
| 28 <outputs> | 28 <outputs> |
| 29 <data format="fasta" name="output" /> | 29 <data format="fasta" name="output" /> |