Mercurial > repos > iuc > bedtools

comparison shuffleBed.xml @ 6:d25966c8ddeb draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 6ce9a5a91d803b9ac9e743d9721ff0ccd2a5a59f-dirty
author iuc
date Sun, 22 May 2016 12:33:32 -0400
parents 607c0576c6ab
children c78cf6fe3018
comparison
equal deleted inserted replaced
5:f8b7dc21b4ee 6:d25966c8ddeb
13 $bedpe 13 $bedpe
14 #if str($seed.seed_choose) == "True": 14 #if str($seed.seed_choose) == "True":
15 -seed $seed.seed 15 -seed $seed.seed
16 #end if 16 #end if
17 #if str($add_bed.add_bed_select) == "not_be": 17 #if str($add_bed.add_bed_select) == "not_be":
18 -excl $add_bed_select.excl 18 -excl $add_bed.excl
19 -f $add_bed_select.overlap 19 -f $add_bed.overlap
20 #elif str($add_bed.add_bed_select) == "be": 20 #elif str($add_bed.add_bed_select) == "be":
21 -incl $add_bed_select.incl 21 -incl $add_bed.incl
22 #end if 22 #end if
23 $chrom 23 $chrom
24 $chromfirst 24 $chromfirst
25 $no_overlap 25 $no_overlap
26 $allow_beyond 26 $allow_beyond