Mercurial > repos > iuc > bedtools

diff sortBed.xml @ 44:589e7e57fd6d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 03a91f6c42c75dc36d09505c2e6a2236178e4695
author iuc
date Mon, 20 Feb 2023 21:49:48 +0000
parents 07e8b80f278c
children 64e2edfe7a2c
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--- a/sortBed.xml	Fri Apr 01 19:02:51 2022 +0000
+++ b/sortBed.xml	Mon Feb 20 21:49:48 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="bedtools_sortbed" name="bedtools SortBED" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
+<tool id="bedtools_sortbed" name="bedtools SortBED" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
     <description>order the intervals</description>
     <macros>
         <import>macros.xml</import>
@@ -25,7 +25,7 @@
             <option value="-chrThenScoreA">chromosome, then by score (asc).</option>
             <option value="-chrThenScoreD">chromosome, then by score (desc).</option>
         </param>
-        <expand macro="input_conditional_genome_file" help="Sort according to the chromosomes declared in a genome file" />
+        <expand macro="input_conditional_genome_file" optional="true" help="Sort according to the chromosomes declared in a genome file" />
     </inputs>
     <outputs>
         <data name="output" format_source="input" metadata_source="input" label="SortBed on ${input.name}"/>