diff closestBed.xml @ 26:95a3b2c25bd1 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59

--- a/closestBed.xml	Fri Apr 20 05:30:23 2018 -0400
+++ b/closestBed.xml	Thu Apr 26 17:02:46 2018 -0400
@@ -30,11 +30,11 @@
 > '$output'
     ]]></command>
     <inputs>
-        <param name="inputA" type="data" format="bed,vcf,gff,gff3" label="BED/VCF/GFF file"/>
+        <param name="inputA" type="data" format="@STD_BEDTOOLS_INPUTS@" label="@STD_BEDTOOLS_INPUT_LABEL@ file"/>
         <!-- overlap with file (inputB) -->
         <conditional name="overlap_with">
-            <param name="source" type="select" label="Overlap with: will you select a BED/VCF/GFF file from your history or use a built-in GFF file?" help="Built-in GFF files contain full annotation of a reference genome">
-                <option value="history" selected="true">Use a BED/VCF/GFF file from the history</option>
+            <param name="source" type="select" label="Overlap with: will you select a @STD_BEDTOOLS_INPUT_LABEL@ file from your history or use a built-in GFF file?" help="Built-in GFF files contain full annotation of a reference genome">
+                <option value="history" selected="true">Use a @STD_BEDTOOLS_INPUT_LABEL@ file from the history</option>
                 <option value="data_table">Use a built-in GFF file</option>
             </param>
             <when value="data_table">
@@ -46,7 +46,7 @@
                 </param>
             </when>
             <when value="history">
-                <param name="inputB" type="data" format="bed,gff,vcf,gff3" multiple="true" label="Select a BED/VCF/GFF file" />
+                <param name="inputB" type="data" format="@STD_BEDTOOLS_INPUTS@" multiple="true" label="Select a @STD_BEDTOOLS_INPUT_LABEL@ file" />
             </when>
         </conditional>