Mercurial > repos > iuc > bedtools
diff expandBed.xml @ 0:b8348686a0b9 draft
Imported from capsule None
author | iuc |
---|---|
date | Tue, 04 Nov 2014 01:45:04 -0500 |
parents | |
children | 82aac94b06c3 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/expandBed.xml Tue Nov 04 01:45:04 2014 -0500 @@ -0,0 +1,30 @@ +<tool id="bedtools_expandbed" name="ExpandBed" version="@WRAPPER_VERSION@.0"> + <description></description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements" /> + <expand macro="stdio" /> + <command> + bedtools expand + -c $cols + -i $inputA + > $output + </command> + <inputs> + <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/> + <param name="cols" type="text" value="" label="Specify the column(s) (comma separated) that should be summarized" /> + </inputs> + <outputs> + <data format_source="inputA" name="output" metadata_source="inputA" label=""/> + </outputs> + <help> + +**What it does** + +Replicate lines in a file based on columns of comma-separated values. + +@REFERENCES@ + </help> + <expand macro="citations" /> +</tool>