Mercurial > repos > iuc > bedtools

diff bamToFastq.xml @ 10:c78cf6fe3018 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 44bebb8a97d64015cbba59f0663e2541035112b6
author iuc
date Mon, 03 Oct 2016 07:36:08 -0400
parents 607c0576c6ab
children e0cec48a4695
line wrap: on
line diff
--- a/bamToFastq.xml	Wed Sep 14 17:30:10 2016 -0400
+++ b/bamToFastq.xml	Mon Oct 03 07:36:08 2016 -0400
@@ -16,8 +16,8 @@
     </command>
     <inputs>
         <param format="bam" name="input" type="data" label="Convert the following BAM file to FASTQ"/>
-        <param name="tags" type="boolean" truevalue="-tags" falsevalue="" selected="False" label="Create FASTQ based on the mate info in the BAM R2 and Q2 tags."/>
-        <param name="fq2" type="boolean" truevalue="-fq2" falsevalue="" selected="False" label="FASTQ for second end.
+        <param name="tags" type="boolean" truevalue="-tags" falsevalue="" checked="False" label="Create FASTQ based on the mate info in the BAM R2 and Q2 tags."/>
+        <param name="fq2" type="boolean" truevalue="-fq2" falsevalue="" checked="False" label="FASTQ for second end.
             Used if BAM contains paired-end data. BAM should be sorted by query name if creating paired FASTQ with this option."/>
     </inputs>
     <outputs>