view expandBed.xml @ 0:b8348686a0b9 draft

Imported from capsule None

<tool id="bedtools_expandbed" name="ExpandBed" version="@WRAPPER_VERSION@.0">
    <description></description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />
    <expand macro="stdio" />
    <command>
        bedtools expand
        -c $cols
        -i $inputA
        &gt; $output
    </command>
    <inputs>
        <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/>
        <param name="cols" type="text" value="" label="Specify the column(s) (comma separated) that should be summarized" />
    </inputs>
    <outputs>
        <data format_source="inputA" name="output" metadata_source="inputA" label=""/>
    </outputs>
    <help>

**What it does**

Replicate lines in a file based on columns of comma-separated values.

@REFERENCES@
    </help>
    <expand macro="citations" />
</tool>