Mercurial > repos > iuc > bedtools
view spacingBed.xml @ 6:d25966c8ddeb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 6ce9a5a91d803b9ac9e743d9721ff0ccd2a5a59f-dirty
author | iuc |
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date | Sun, 22 May 2016 12:33:32 -0400 |
parents | 607c0576c6ab |
children | 7308cc546a36 |
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<tool id="bedtools_spacingbed" name="SpacingBed" version="@WRAPPER_VERSION@.0"> <description>reports the distances between features</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <expand macro="stdio" /> <command> <![CDATA[ bedtools spacing -i $input > $output ]]> </command> <inputs> <param format="bed,vcf,gff,gff3,bam" name="input" type="data" label="BED/VCF/GFF/BAM file"/> </inputs> <outputs> <data format_source="input" name="output" metadata_source="input" label="Spaces between intervals of ${input}"/> </outputs> <tests> <test> <param name="input" value="a.bed" ftype="bed" /> <output name="output" file="spacingBed_result1.bed" ftype="bed" /> </test> </tests> <help> <![CDATA[ **What it does** Report the spacing between intervals in a file. @REFERENCES@ ]]> </help> <expand macro="citations" /> </tool>