Mercurial > repos > iuc > bedtools
view spacingBed.xml @ 34:dde39ba9c031 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b68002321ade5e160c556517a98ffb70f068be95
author | iuc |
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date | Mon, 29 Apr 2019 05:55:48 -0400 |
parents | 4f7a5ccd2ae9 |
children | 3e38c9b3214f |
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<tool id="bedtools_spacingbed" name="bedtools SpacingBed" version="@TOOL_VERSION@"> <description>reports the distances between features</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <expand macro="stdio" /> <command><![CDATA[ bedtools spacing -i '$input' > '$output' ]]></command> <inputs> <param name="input" argument="-i" type="data" format="bam,@STD_BEDTOOLS_INPUTS@" label="@STD_BEDTOOLS_INPUT_LABEL@/BAM file"/> </inputs> <outputs> <data name="output" format_source="input" metadata_source="input" label="Spaces between intervals of ${input}"/> </outputs> <tests> <test> <param name="input" value="a.bed" ftype="bed" /> <output name="output" file="spacingBed_result1.bed" ftype="bed" /> </test> </tests> <help><![CDATA[ **What it does** Report the spacing between intervals in a file. @REFERENCES@ ]]></help> <expand macro="citations" /> </tool>