Mercurial > repos > iuc > bicodon_counts_from_fasta

diff test-data/codon_freq_from_bicodon.tabular @ 0:e13169dca7c8 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/naltorfs/ commit cbedf7b5968b45a08df88d4ad799951d6f50a2bd"
author iuc
date Mon, 11 Apr 2022 20:36:48 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/codon_freq_from_bicodon.tabular	Mon Apr 11 20:36:48 2022 +0000
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+#frame	codon_count	aaa	aac	aag	aat	aca	acc	acg	act	aga	agc	agg	agt	ata	atc	atg	att	caa	cac	cag	cat	cca	ccc	ccg	cct	cga	cgc	cgg	cgt	cta	ctc	ctg	ctt	gaa	gac	gag	gat	gca	gcc	gcg	gct	gga	ggc	ggg	ggt	gta	gtc	gtg	gtt	taa	tac	tag	tat	tca	tcc	tcg	tct	tga	tgc	tgg	tgt	tta	ttc	ttg	ttt
+2-counts	855	4	12	14	8	13	23	8	15	28	18	25	12	8	27	31	7	3	11	17	4	23	28	16	14	4	12	2	1	10	16	35	7	4	7	16	4	16	38	6	14	15	15	18	4	4	11	25	4	1	12	3	3	18	15	7	16	16	17	26	10	8	20	19	7
+2-percent	855	0.4678362573099415500088582576	1.4035087719298244834931210789	1.6374269005847954527865795171	0.9356725146198831000177165151	1.5204678362573098571175478355	2.6900584795321638154064203263	0.9356725146198831000177165151	1.7543859649122806043664013487	3.2748538011695909055731590342	2.1052631578947367252396816184	2.9239766081871341185660639894	1.4035087719298244834931210789	0.9356725146198831000177165151	3.1578947368421053099041273526	3.6257309941520468044018343790	0.8187134502923977263932897586	0.3508771929824561208732802697	1.2865497076023393319132992474	1.9883040935672515736598597869	0.4678362573099415500088582576	2.6900584795321638154064203263	3.2748538011695909055731590342	1.8713450292397662000354330303	1.6374269005847954527865795171	0.4678362573099415500088582576	1.4035087719298244834931210789	0.2339181286549707750044291288	0.1169590643274853875022145644	1.1695906432748537362442675658	1.8713450292397662000354330303	4.0935672514619882988995414053	0.8187134502923977263932897586	0.4678362573099415500088582576	0.8187134502923977263932897586	1.8713450292397662000354330303	0.4678362573099415500088582576	1.8713450292397662000354330303	4.4444444444444446418174266000	0.7017543859649122417465605395	1.6374269005847954527865795171	1.7543859649122806043664013487	1.7543859649122806043664013487	2.1052631578947367252396816184	0.4678362573099415500088582576	0.4678362573099415500088582576	1.2865497076023393319132992474	2.9239766081871341185660639894	0.4678362573099415500088582576	0.1169590643274853875022145644	1.4035087719298244834931210789	0.3508771929824561208732802697	0.3508771929824561208732802697	2.1052631578947367252396816184	1.7543859649122806043664013487	0.8187134502923977263932897586	1.8713450292397662000354330303	1.8713450292397662000354330303	1.9883040935672515736598597869	3.0409356725146197142350956710	1.1695906432748537362442675658	0.9356725146198831000177165151	2.3391812865497074724885351316	2.2222222222222223209087133000	0.8187134502923977263932897586
+3-counts	855	3	2	3	4	12	10	10	10	17	12	16	5	2	7	7	3	23	10	19	18	37	23	19	25	7	16	10	4	8	14	19	18	27	10	14	12	23	12	8	19	31	18	11	11	3	7	8	9	11	6	4	9	22	15	17	20	27	36	28	19	1	5	9	10
+3-percent	855	0.3508771929824561208732802697	0.2339181286549707750044291288	0.3508771929824561208732802697	0.4678362573099415500088582576	1.4035087719298244834931210789	1.1695906432748537362442675658	1.1695906432748537362442675658	1.1695906432748537362442675658	1.9883040935672515736598597869	1.4035087719298244834931210789	1.8713450292397662000354330303	0.5847953216374268681221337829	0.2339181286549707750044291288	0.8187134502923977263932897586	0.8187134502923977263932897586	0.3508771929824561208732802697	2.6900584795321638154064203263	1.1695906432748537362442675658	2.2222222222222223209087133000	2.1052631578947367252396816184	4.3274853801169594902376047685	2.6900584795321638154064203263	2.2222222222222223209087133000	2.9239766081871341185660639894	0.8187134502923977263932897586	1.8713450292397662000354330303	1.1695906432748537362442675658	0.4678362573099415500088582576	0.9356725146198831000177165151	1.6374269005847954527865795171	2.2222222222222223209087133000	2.1052631578947367252396816184	3.1578947368421053099041273526	1.1695906432748537362442675658	1.6374269005847954527865795171	1.4035087719298244834931210789	2.6900584795321638154064203263	1.4035087719298244834931210789	0.9356725146198831000177165151	2.2222222222222223209087133000	3.6257309941520468044018343790	2.1052631578947367252396816184	1.2865497076023393319132992474	1.2865497076023393319132992474	0.3508771929824561208732802697	0.8187134502923977263932897586	0.9356725146198831000177165151	1.0526315789473683626198408092	1.2865497076023393319132992474	0.7017543859649122417465605395	0.4678362573099415500088582576	1.0526315789473683626198408092	2.5730994152046786638265984948	1.7543859649122806043664013487	1.9883040935672515736598597869	2.3391812865497074724885351316	3.1578947368421053099041273526	4.2105263157894734504793632368	3.2748538011695909055731590342	2.2222222222222223209087133000	0.1169590643274853875022145644	0.5847953216374268681221337829	1.0526315789473683626198408092	1.1695906432748537362442675658