Mercurial > repos > iuc > bioext_bam2msa
comparison bam2msa.xml @ 3:b226e0c805a5 draft
"planemo upload for repository https://github.com/davebx/bioext-gx/ commit af3bfbbd3f1236bf96a25bcb8483f2889295ec0c"
| author | iuc |
|---|---|
| date | Fri, 20 Aug 2021 21:03:56 +0000 |
| parents | 0a4ad829d87a |
| children | a68cb16fa1a0 |
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| 2:0a4ad829d87a | 3:b226e0c805a5 |
|---|---|
| 21 <outputs> | 21 <outputs> |
| 22 <data name="output" format="fasta"/> | 22 <data name="output" format="fasta"/> |
| 23 </outputs> | 23 </outputs> |
| 24 <tests> | 24 <tests> |
| 25 <test> | 25 <test> |
| 26 <param name="input" ftype="bam" value="bealign-out1.bam"/> | 26 <param name="input" ftype="bam" value="bam2msa-in1.bam"/> |
| 27 <output name="output" file="bam2msa-out1.fa"/> | 27 <output name="output" file="bam2msa-out1.fa"/> |
| 28 </test> | 28 </test> |
| 29 <test> | 29 <test> |
| 30 <param name="input" ftype="bam" value="bealign-out2.bam"/> | 30 <param name="input" ftype="bam" value="bam2msa-in2.bam"/> |
| 31 <output name="output" file="bam2msa-out2.fa"/> | 31 <output name="output" file="bam2msa-out2.fa"/> |
| 32 </test> | 32 </test> |
| 33 </tests> | 33 </tests> |
| 34 <help>Extract MSA from a BAM file</help> | 34 <help>Extract MSA from a BAM file</help> |
| 35 <expand macro="citations"/> | 35 <expand macro="citations"/> |