# HG changeset patch
# User iuc
# Date 1635531090 0
# Node ID c239e93d9f04e154efb017735fb3825a26623db5
# Parent a287431cdf4f4a7c73ba253e77a52555668989d9
"planemo upload for repository https://github.com/davebx/bioext-gx/ commit c21521441846e419a69366ee10a30aa828573095"
diff -r a287431cdf4f -r c239e93d9f04 bealign.xml
--- a/bealign.xml Tue Oct 05 09:52:56 2021 +0000
+++ b/bealign.xml Fri Oct 29 18:11:30 2021 +0000
@@ -3,11 +3,11 @@
to a reference using a codon alignment algorithm
macros.xml
- 2
+ 0
gawk
- samtools
+ samtools
bealign --version
diff -r a287431cdf4f -r c239e93d9f04 macros.xml
--- a/macros.xml Tue Oct 05 09:52:56 2021 +0000
+++ b/macros.xml Fri Oct 29 18:11:30 2021 +0000
@@ -1,6 +1,6 @@
- 0.20.1
+ 0.20.2
20.05
]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]>