Mercurial > repos > iuc > biom_from_uc
comparison biom_from_uc.xml @ 4:c82e077989ee draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/biom_format commit ddde8018cc6ff30dbb448e66be5433ce36e56b55
| author | iuc |
|---|---|
| date | Fri, 19 Aug 2022 18:54:52 +0000 |
| parents | 2cdeed709bf4 |
| children | bd2d2d53d5dd |
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| 3:19d6d74091b5 | 4:c82e077989ee |
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| 8 <command detect_errors="exit_code"> | 8 <command detect_errors="exit_code"> |
| 9 <![CDATA[ | 9 <![CDATA[ |
| 10 biom from-uc | 10 biom from-uc |
| 11 --input-fp '$input_fp' | 11 --input-fp '$input_fp' |
| 12 --output-fp '$output_fp' | 12 --output-fp '$output_fp' |
| 13 #if $rep_set_fp | |
| 14 --rep-set-fp '$rep_set_fp' | |
| 15 #end if | |
| 13 ]]> | 16 ]]> |
| 14 </command> | 17 </command> |
| 15 <inputs> | 18 <inputs> |
| 16 <param name="input_fp" argument="--input-fp" type="data" format="txt" label="UC File" /> | 19 <param name="input_fp" argument="--input-fp" type="data" format="txt" label="UC File" /> |
| 17 <param name="rep_set_fp" argument="--rep-set-fp" type="data" format="fasta" optional="true" label="Fasta file containing representative sequences with where sequences are labeled with OTU identifiers, and description fields contain original sequence identifiers" help="This output is created, for example, by vsearch with the --relabel_sha1 --relabel_keep options."/> | 20 <param name="rep_set_fp" argument="--rep-set-fp" type="data" format="fasta" optional="true" label="Fasta file containing representative sequences with where sequences are labeled with OTU identifiers, and description fields contain original sequence identifiers" help="This output is created, for example, by vsearch with the --relabel_sha1 --relabel_keep options."/> |