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breseq version 0.35.5
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
JC | 41,405 | (GCG)2→5 | coding (325/873 nt) | NinC → | NinC protein |
MC JC | 41,601 | (AAC)2→1 | coding (521‑523/873 nt) | NinC → | NinC protein |
JC | 41,716 | (T)5→9 | coding (636/873 nt) | NinC → | NinC protein |
MC JC | 44,075 | (CAAA)2→1 | coding (190‑193/624 nt) | Q → | late gene regulator |
RA | 47,317 | N→T | ?87I (NTC→ATC) | lambdap78 ← | putative envelope protein |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_001416 | 1 | 38810 | 38810 | NA [0] | [10] 13 | nu1–[O] | nu1,A,W,B,C,nu3,D,E,Fi,Fii,Z,U,V,G,T,H,M,L,K,I,J,lom,orf‑401,orf206b,orf‑314,orf‑194,ea47,ea31,ea59,int,xis,lambdap35,ea8.5,ea22,orf61,orf63,orf60a,exo,bet,gam,kil,cIII,ea10,ral,orf28,lambdap48,N,rexb,rexa,cI,cro,cII,[O] |
* | * | ÷ | NC_001416 | 48475 | 48502 | 28 | 12 [10] | [0] NA | lambdap79/– | hypothetical protein/– |