Mercurial > repos > iuc > breseq
comparison test-data/gdout.txt @ 3:0d18a3ba2d1c draft default tip
"planemo upload commit 6e869b3e13ed7b012b270f14fce812613642e5f2"
author | iuc |
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date | Mon, 04 Apr 2022 08:30:52 +0000 |
parents | 82fb5e3bb93e |
children |
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2:82fb5e3bb93e | 3:0d18a3ba2d1c |
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1 #=GENOME_DIFF 1.0 | 1 #=GENOME_DIFF 1.0 |
2 #=TITLE smallest | 2 #=TITLE smallest |
3 #=CREATED 12:47:14 07 Apr 2021 | 3 #=CREATED 09:02:10 11 Oct 2021 |
4 #=PROGRAM breseq 0.35.5 | 4 #=PROGRAM breseq 0.35.5 |
5 #=COMMAND breseq --num-processors 1 -o results --reference /home/berntm/.planemo/planemo_tmp_c9ga3mbq/test-data/lambda.gbk /tmp/tmpld3eebea/files/8/e/1/dataset_8e1ab48f-6786-4ed7-bf44-beec17749bb3.dat --name smallest | 5 #=COMMAND breseq --num-processors 1 -o results --reference /home/berntm/.planemo/planemo_tmp_761ytc5o/test-data/lambda.gbk /tmp/tmpxwfwo8j7/files/c/c/a/dataset_cca0e808-86ed-4449-ad0e-b35d828c94e7.dat --name smallest |
6 #=REFSEQ /home/berntm/.planemo/planemo_tmp_c9ga3mbq/test-data/lambda.gbk | 6 #=REFSEQ /home/berntm/.planemo/planemo_tmp_761ytc5o/test-data/lambda.gbk |
7 #=READSEQ /tmp/tmpld3eebea/files/8/e/1/dataset_8e1ab48f-6786-4ed7-bf44-beec17749bb3.dat | 7 #=READSEQ /tmp/tmpxwfwo8j7/files/c/c/a/dataset_cca0e808-86ed-4449-ad0e-b35d828c94e7.dat |
8 #=CONVERTED-BASES 250000 | 8 #=CONVERTED-BASES 62500 |
9 #=CONVERTED-READS 5000 | 9 #=CONVERTED-READS 1250 |
10 #=INPUT-BASES 250000 | 10 #=INPUT-BASES 62500 |
11 #=INPUT-READS 5000 | 11 #=INPUT-READS 1250 |
12 #=MAPPED-BASES 242755 | 12 #=MAPPED-BASES 61052 |
13 #=MAPPED-READS 4870 | 13 #=MAPPED-READS 1225 |
14 INS 1 11 NC_001416 41405 GCGGCGGCG repeat_length=3 repeat_new_copies=5 repeat_ref_copies=2 repeat_seq=GCG | 14 INS 1 9 NC_001416 41405 GCGGCGGCG repeat_length=3 repeat_new_copies=5 repeat_ref_copies=2 repeat_seq=GCG |
15 DEL 2 8,12 NC_001416 41601 3 repeat_length=3 repeat_new_copies=1 repeat_ref_copies=2 repeat_seq=AAC | 15 DEL 2 6,10 NC_001416 41601 3 repeat_length=3 repeat_new_copies=1 repeat_ref_copies=2 repeat_seq=AAC |
16 INS 3 13 NC_001416 41716 TTTT repeat_length=1 repeat_new_copies=9 repeat_ref_copies=5 repeat_seq=T | 16 SNP 3 4 NC_001416 47317 T |
17 DEL 4 9,14 NC_001416 44075 4 repeat_length=4 repeat_new_copies=1 repeat_ref_copies=2 repeat_seq=CAAA | 17 RA 4 . NC_001416 47317 0 N T consensus_score=31.3 frequency=1 major_base=T major_cov=7/5 major_frequency=1.000e+00 minor_base=N minor_cov=0/0 new_cov=7/5 polymorphism_frequency=1.000e+00 polymorphism_score=NA prediction=consensus ref_cov=0/0 total_cov=7/5 |
18 SNP 5 6 NC_001416 47317 T | 18 MC 5 . NC_001416 1 38811 0 0 left_inside_cov=0 left_outside_cov=NA right_inside_cov=1 right_outside_cov=2 |
19 RA 6 . NC_001416 47317 0 N T consensus_score=105.6 frequency=1 major_base=T major_cov=17/17 major_frequency=1.000e+00 minor_base=N minor_cov=0/0 new_cov=17/17 polymorphism_frequency=1.000e+00 polymorphism_score=NA prediction=consensus ref_cov=0/0 total_cov=17/17 | 19 MC 6 . NC_001416 41601 41603 0 0 left_inside_cov=0 left_outside_cov=8 right_inside_cov=0 right_outside_cov=7 |
20 MC 7 . NC_001416 1 38810 0 0 left_inside_cov=0 left_outside_cov=NA right_inside_cov=10 right_outside_cov=13 | 20 MC 7 . NC_001416 48305 48312 0 0 left_inside_cov=1 left_outside_cov=2 right_inside_cov=1 right_outside_cov=2 |
21 MC 8 . NC_001416 41601 41603 0 0 left_inside_cov=0 left_outside_cov=29 right_inside_cov=0 right_outside_cov=28 | 21 MC 8 . NC_001416 48485 48502 0 0 left_inside_cov=1 left_outside_cov=2 right_inside_cov=0 right_outside_cov=NA |
22 MC 9 . NC_001416 44075 44078 0 0 left_inside_cov=0 left_outside_cov=28 right_inside_cov=0 right_outside_cov=27 | 22 JC 9 . NC_001416 41398 1 NC_001416 41405 -1 -1 alignment_overlap=-1 coverage_minus=2 coverage_plus=4 flanking_left=50 flanking_right=50 frequency=1 junction_possible_overlap_registers=48 key=NC_001416__41398__1__NC_001416__41405__-1__-1__C__50__50__0__0 max_left=38 max_left_minus=38 max_left_plus=38 max_min_left=23 max_min_left_minus=23 max_min_left_plus=17 max_min_right=11 max_min_right_minus=11 max_min_right_plus=11 max_pos_hash_score=96 max_right=47 max_right_minus=26 max_right_plus=47 neg_log10_pos_hash_p_value=0.0 new_junction_coverage=1.14 new_junction_read_count=7 polymorphism_frequency=9.346e-01 pos_hash_score=6 prediction=consensus side_1_annotate_key=gene side_1_continuation=0 side_1_coverage=0.00 side_1_overlap=0 side_1_possible_overlap_registers=49 side_1_read_count=0 side_1_redundant=0 side_2_annotate_key=gene side_2_continuation=0 side_2_coverage=0.16 side_2_overlap=0 side_2_possible_overlap_registers=49 side_2_read_count=1 side_2_redundant=0 total_non_overlap_reads=6 unique_read_sequence=C |
23 MC 10 . NC_001416 48475 48502 0 0 left_inside_cov=10 left_outside_cov=12 right_inside_cov=0 right_outside_cov=NA | 23 JC 10 . NC_001416 41600 -1 NC_001416 41604 1 0 alignment_overlap=4 coverage_minus=5 coverage_plus=1 flanking_left=50 flanking_right=50 frequency=1 junction_possible_overlap_registers=45 key=NC_001416__41600__-1__NC_001416__41600__1__4____50__50__0__0 max_left=20 max_left_minus=20 max_left_plus=10 max_min_left=20 max_min_left_minus=20 max_min_left_plus=10 max_min_right=0 max_min_right_minus=0 max_min_right_plus=0 max_pos_hash_score=90 max_right=44 max_right_minus=44 max_right_plus=36 neg_log10_pos_hash_p_value=0.0 new_junction_coverage=1.05 new_junction_read_count=6 polymorphism_frequency=1.000e+00 pos_hash_score=5 prediction=consensus side_1_annotate_key=gene side_1_continuation=0 side_1_coverage=0.00 side_1_overlap=4 side_1_possible_overlap_registers=49 side_1_read_count=0 side_1_redundant=0 side_2_annotate_key=gene side_2_continuation=0 side_2_coverage=0.00 side_2_overlap=0 side_2_possible_overlap_registers=45 side_2_read_count=0 side_2_redundant=0 total_non_overlap_reads=6 |
24 JC 11 . NC_001416 41398 1 NC_001416 41405 -1 -1 alignment_overlap=-1 coverage_minus=5 coverage_plus=18 flanking_left=50 flanking_right=50 frequency=1 junction_possible_overlap_registers=48 key=NC_001416__41398__1__NC_001416__41405__-1__-1__C__50__50__0__0 max_left=44 max_left_minus=38 max_left_plus=44 max_min_left=24 max_min_left_minus=23 max_min_left_plus=24 max_min_right=23 max_min_right_minus=11 max_min_right_plus=23 max_pos_hash_score=96 max_right=47 max_right_minus=34 max_right_plus=47 neg_log10_pos_hash_p_value=0.0 new_junction_coverage=1.10 new_junction_read_count=27 polymorphism_frequency=9.168e-01 pos_hash_score=21 prediction=consensus side_1_annotate_key=gene side_1_continuation=0 side_1_coverage=0.04 side_1_overlap=0 side_1_possible_overlap_registers=49 side_1_read_count=1 side_1_redundant=0 side_2_annotate_key=gene side_2_continuation=0 side_2_coverage=0.16 side_2_overlap=0 side_2_possible_overlap_registers=49 side_2_read_count=4 side_2_redundant=0 total_non_overlap_reads=23 unique_read_sequence=C | 24 UN 11 . NC_001416 1 38822 |
25 JC 12 . NC_001416 41600 -1 NC_001416 41604 1 0 alignment_overlap=4 coverage_minus=14 coverage_plus=8 flanking_left=50 flanking_right=50 frequency=1 junction_possible_overlap_registers=45 key=NC_001416__41600__-1__NC_001416__41600__1__4____50__50__0__0 max_left=42 max_left_minus=42 max_left_plus=38 max_min_left=22 max_min_left_minus=20 max_min_left_plus=22 max_min_right=20 max_min_right_minus=12 max_min_right_plus=20 max_pos_hash_score=90 max_right=44 max_right_minus=44 max_right_plus=37 neg_log10_pos_hash_p_value=0.0 new_junction_coverage=1.00 new_junction_read_count=23 polymorphism_frequency=1.000e+00 pos_hash_score=19 prediction=consensus side_1_annotate_key=gene side_1_continuation=0 side_1_coverage=0.00 side_1_overlap=4 side_1_possible_overlap_registers=49 side_1_read_count=0 side_1_redundant=0 side_2_annotate_key=gene side_2_continuation=0 side_2_coverage=0.00 side_2_overlap=0 side_2_possible_overlap_registers=45 side_2_read_count=0 side_2_redundant=0 total_non_overlap_reads=22 | 25 UN 12 . NC_001416 38880 38882 |
26 JC 13 . NC_001416 41712 1 NC_001416 41715 -1 0 alignment_overlap=1 coverage_minus=11 coverage_plus=11 flanking_left=50 flanking_right=50 frequency=1 junction_possible_overlap_registers=48 key=NC_001416__41712__1__NC_001416__41716__-1__1____50__50__0__0 max_left=48 max_left_minus=39 max_left_plus=48 max_min_left=21 max_min_left_minus=21 max_min_left_plus=18 max_min_right=23 max_min_right_minus=23 max_min_right_plus=23 max_pos_hash_score=96 max_right=46 max_right_minus=34 max_right_plus=46 neg_log10_pos_hash_p_value=0.0 new_junction_coverage=1.06 new_junction_read_count=26 polymorphism_frequency=8.826e-01 pos_hash_score=21 prediction=consensus side_1_annotate_key=gene side_1_continuation=0 side_1_coverage=0.16 side_1_overlap=1 side_1_possible_overlap_registers=49 side_1_read_count=4 side_1_redundant=0 side_2_annotate_key=gene side_2_continuation=0 side_2_coverage=0.12 side_2_overlap=0 side_2_possible_overlap_registers=48 side_2_read_count=3 side_2_redundant=0 total_non_overlap_reads=22 | 26 UN 13 . NC_001416 38885 38893 |
27 JC 14 . NC_001416 44074 -1 NC_001416 44079 1 0 alignment_overlap=5 coverage_minus=19 coverage_plus=5 flanking_left=50 flanking_right=50 frequency=1 junction_possible_overlap_registers=44 key=NC_001416__44074__-1__NC_001416__44074__1__5____50__50__0__0 max_left=44 max_left_minus=43 max_left_plus=44 max_min_left=21 max_min_left_minus=21 max_min_left_plus=18 max_min_right=22 max_min_right_minus=22 max_min_right_plus=12 max_pos_hash_score=88 max_right=43 max_right_minus=43 max_right_plus=27 neg_log10_pos_hash_p_value=0.0 new_junction_coverage=1.11 new_junction_read_count=25 polymorphism_frequency=1.000e+00 pos_hash_score=20 prediction=consensus side_1_annotate_key=gene side_1_continuation=0 side_1_coverage=0.00 side_1_overlap=5 side_1_possible_overlap_registers=49 side_1_read_count=0 side_1_redundant=0 side_2_annotate_key=gene side_2_continuation=0 side_2_coverage=0.00 side_2_overlap=0 side_2_possible_overlap_registers=44 side_2_read_count=0 side_2_redundant=0 total_non_overlap_reads=24 | 27 UN 14 . NC_001416 38904 38904 |
28 UN 15 . NC_001416 1 38807 | 28 UN 15 . NC_001416 38906 38906 |
29 UN 16 . NC_001416 41601 41603 | 29 UN 16 . NC_001416 38910 38911 |
30 UN 17 . NC_001416 44075 44078 | 30 UN 17 . NC_001416 38914 38924 |
31 UN 18 . NC_001416 48488 48502 | 31 UN 18 . NC_001416 38926 38926 |
32 UN 19 . NC_001416 38970 38970 | |
33 UN 20 . NC_001416 38972 38985 | |
34 UN 21 . NC_001416 38988 38999 | |
35 UN 22 . NC_001416 39001 39001 | |
36 UN 23 . NC_001416 39003 39007 | |
37 UN 24 . NC_001416 39010 39010 | |
38 UN 25 . NC_001416 39014 39014 | |
39 UN 26 . NC_001416 39017 39017 | |
40 UN 27 . NC_001416 39021 39022 | |
41 UN 28 . NC_001416 39024 39025 | |
42 UN 29 . NC_001416 39032 39033 | |
43 UN 30 . NC_001416 39037 39037 | |
44 UN 31 . NC_001416 39039 39100 | |
45 UN 32 . NC_001416 39104 39104 | |
46 UN 33 . NC_001416 39106 39106 | |
47 UN 34 . NC_001416 39110 39110 | |
48 UN 35 . NC_001416 39113 39135 | |
49 UN 36 . NC_001416 39138 39155 | |
50 UN 37 . NC_001416 39242 39258 | |
51 UN 38 . NC_001416 39262 39262 | |
52 UN 39 . NC_001416 39264 39264 | |
53 UN 40 . NC_001416 39266 39267 | |
54 UN 41 . NC_001416 39271 39294 | |
55 UN 42 . NC_001416 39296 39304 | |
56 UN 43 . NC_001416 39306 39306 | |
57 UN 44 . NC_001416 39309 39311 | |
58 UN 45 . NC_001416 39313 39315 | |
59 UN 46 . NC_001416 39317 39317 | |
60 UN 47 . NC_001416 39319 39319 | |
61 UN 48 . NC_001416 39321 39364 | |
62 UN 49 . NC_001416 39367 39370 | |
63 UN 50 . NC_001416 39391 39391 | |
64 UN 51 . NC_001416 39443 39443 | |
65 UN 52 . NC_001416 39445 39448 | |
66 UN 53 . NC_001416 39509 39509 | |
67 UN 54 . NC_001416 39511 39512 | |
68 UN 55 . NC_001416 39514 39518 | |
69 UN 56 . NC_001416 39571 39571 | |
70 UN 57 . NC_001416 39581 39581 | |
71 UN 58 . NC_001416 39583 39601 | |
72 UN 59 . NC_001416 39608 39608 | |
73 UN 60 . NC_001416 39641 39646 | |
74 UN 61 . NC_001416 39758 39763 | |
75 UN 62 . NC_001416 39765 39777 | |
76 UN 63 . NC_001416 39787 39787 | |
77 UN 64 . NC_001416 39798 39798 | |
78 UN 65 . NC_001416 39836 39836 | |
79 UN 66 . NC_001416 39838 39838 | |
80 UN 67 . NC_001416 39847 39880 | |
81 UN 68 . NC_001416 39885 39885 | |
82 UN 69 . NC_001416 39888 39888 | |
83 UN 70 . NC_001416 39898 39901 | |
84 UN 71 . NC_001416 39903 39903 | |
85 UN 72 . NC_001416 40076 40076 | |
86 UN 73 . NC_001416 40079 40079 | |
87 UN 74 . NC_001416 40172 40172 | |
88 UN 75 . NC_001416 40179 40181 | |
89 UN 76 . NC_001416 40225 40226 | |
90 UN 77 . NC_001416 40228 40229 | |
91 UN 78 . NC_001416 40235 40235 | |
92 UN 79 . NC_001416 40238 40270 | |
93 UN 80 . NC_001416 40298 40304 | |
94 UN 81 . NC_001416 40320 40320 | |
95 UN 82 . NC_001416 40322 40322 | |
96 UN 83 . NC_001416 40325 40326 | |
97 UN 84 . NC_001416 40328 40328 | |
98 UN 85 . NC_001416 40349 40352 | |
99 UN 86 . NC_001416 40354 40438 | |
100 UN 87 . NC_001416 40490 40491 | |
101 UN 88 . NC_001416 40537 40537 | |
102 UN 89 . NC_001416 40539 40558 | |
103 UN 90 . NC_001416 40560 40594 | |
104 UN 91 . NC_001416 40642 40642 | |
105 UN 92 . NC_001416 40647 40648 | |
106 UN 93 . NC_001416 40650 40651 | |
107 UN 94 . NC_001416 40653 40654 | |
108 UN 95 . NC_001416 40657 40657 | |
109 UN 96 . NC_001416 40659 40661 | |
110 UN 97 . NC_001416 40674 40675 | |
111 UN 98 . NC_001416 40781 40781 | |
112 UN 99 . NC_001416 40785 40785 | |
113 UN 100 . NC_001416 40803 40804 | |
114 UN 101 . NC_001416 40807 40808 | |
115 UN 102 . NC_001416 40811 40812 | |
116 UN 103 . NC_001416 40815 40818 | |
117 UN 104 . NC_001416 40843 40843 | |
118 UN 105 . NC_001416 40853 40854 | |
119 UN 106 . NC_001416 40864 40864 | |
120 UN 107 . NC_001416 40866 40875 | |
121 UN 108 . NC_001416 40878 40878 | |
122 UN 109 . NC_001416 40880 40880 | |
123 UN 110 . NC_001416 40883 40884 | |
124 UN 111 . NC_001416 40886 40886 | |
125 UN 112 . NC_001416 40888 40890 | |
126 UN 113 . NC_001416 40892 40892 | |
127 UN 114 . NC_001416 40907 40907 | |
128 UN 115 . NC_001416 40917 40917 | |
129 UN 116 . NC_001416 40970 41049 | |
130 UN 117 . NC_001416 41053 41053 | |
131 UN 118 . NC_001416 41055 41055 | |
132 UN 119 . NC_001416 41058 41058 | |
133 UN 120 . NC_001416 41060 41063 | |
134 UN 121 . NC_001416 41108 41134 | |
135 UN 122 . NC_001416 41185 41186 | |
136 UN 123 . NC_001416 41189 41189 | |
137 UN 124 . NC_001416 41191 41376 | |
138 UN 125 . NC_001416 41379 41379 | |
139 UN 126 . NC_001416 41395 41395 | |
140 UN 127 . NC_001416 41414 41414 | |
141 UN 128 . NC_001416 41467 41467 | |
142 UN 129 . NC_001416 41478 41494 | |
143 UN 130 . NC_001416 41496 41497 | |
144 UN 131 . NC_001416 41499 41501 | |
145 UN 132 . NC_001416 41503 41509 | |
146 UN 133 . NC_001416 41515 41517 | |
147 UN 134 . NC_001416 41521 41532 | |
148 UN 135 . NC_001416 41535 41535 | |
149 UN 136 . NC_001416 41539 41539 | |
150 UN 137 . NC_001416 41601 41603 | |
151 UN 138 . NC_001416 41649 41649 | |
152 UN 139 . NC_001416 41652 41729 | |
153 UN 140 . NC_001416 41790 41792 | |
154 UN 141 . NC_001416 41799 41799 | |
155 UN 142 . NC_001416 41801 41802 | |
156 UN 143 . NC_001416 41804 41806 | |
157 UN 144 . NC_001416 41809 41819 | |
158 UN 145 . NC_001416 41823 41823 | |
159 UN 146 . NC_001416 41825 41825 | |
160 UN 147 . NC_001416 41828 41831 | |
161 UN 148 . NC_001416 41833 41845 | |
162 UN 149 . NC_001416 41849 41870 | |
163 UN 150 . NC_001416 41872 41872 | |
164 UN 151 . NC_001416 41876 41876 | |
165 UN 152 . NC_001416 41882 41883 | |
166 UN 153 . NC_001416 41885 41887 | |
167 UN 154 . NC_001416 41889 41891 | |
168 UN 155 . NC_001416 41895 41895 | |
169 UN 156 . NC_001416 41901 41901 | |
170 UN 157 . NC_001416 41903 41903 | |
171 UN 158 . NC_001416 41905 41975 | |
172 UN 159 . NC_001416 41981 41987 | |
173 UN 160 . NC_001416 41990 41990 | |
174 UN 161 . NC_001416 42046 42047 | |
175 UN 162 . NC_001416 42050 42050 | |
176 UN 163 . NC_001416 42064 42065 | |
177 UN 164 . NC_001416 42067 42188 | |
178 UN 165 . NC_001416 42215 42231 | |
179 UN 166 . NC_001416 42234 42258 | |
180 UN 167 . NC_001416 42308 42309 | |
181 UN 168 . NC_001416 42312 42314 | |
182 UN 169 . NC_001416 42320 42320 | |
183 UN 170 . NC_001416 42335 42335 | |
184 UN 171 . NC_001416 42340 42340 | |
185 UN 172 . NC_001416 42342 42344 | |
186 UN 173 . NC_001416 42346 42346 | |
187 UN 174 . NC_001416 42348 42372 | |
188 UN 175 . NC_001416 42374 42374 | |
189 UN 176 . NC_001416 42376 42411 | |
190 UN 177 . NC_001416 42423 42429 | |
191 UN 178 . NC_001416 42431 42434 | |
192 UN 179 . NC_001416 42451 42451 | |
193 UN 180 . NC_001416 42453 42455 | |
194 UN 181 . NC_001416 42458 42491 | |
195 UN 182 . NC_001416 42524 42529 | |
196 UN 183 . NC_001416 42551 42551 | |
197 UN 184 . NC_001416 42583 42587 | |
198 UN 185 . NC_001416 42589 42590 | |
199 UN 186 . NC_001416 42594 42594 | |
200 UN 187 . NC_001416 42596 42611 | |
201 UN 188 . NC_001416 42616 42616 | |
202 UN 189 . NC_001416 42618 42618 | |
203 UN 190 . NC_001416 42677 42677 | |
204 UN 191 . NC_001416 42765 42767 | |
205 UN 192 . NC_001416 42769 42769 | |
206 UN 193 . NC_001416 42784 42819 | |
207 UN 194 . NC_001416 42824 42825 | |
208 UN 195 . NC_001416 42828 42828 | |
209 UN 196 . NC_001416 42867 42871 | |
210 UN 197 . NC_001416 42920 42922 | |
211 UN 198 . NC_001416 42925 43025 | |
212 UN 199 . NC_001416 43027 43027 | |
213 UN 200 . NC_001416 43037 43037 | |
214 UN 201 . NC_001416 43127 43128 | |
215 UN 202 . NC_001416 43130 43131 | |
216 UN 203 . NC_001416 43141 43141 | |
217 UN 204 . NC_001416 43144 43145 | |
218 UN 205 . NC_001416 43147 43156 | |
219 UN 206 . NC_001416 43160 43170 | |
220 UN 207 . NC_001416 43181 43182 | |
221 UN 208 . NC_001416 43184 43189 | |
222 UN 209 . NC_001416 43191 43191 | |
223 UN 210 . NC_001416 43193 43195 | |
224 UN 211 . NC_001416 43248 43279 | |
225 UN 212 . NC_001416 43337 43337 | |
226 UN 213 . NC_001416 43381 43381 | |
227 UN 214 . NC_001416 43383 43383 | |
228 UN 215 . NC_001416 43385 43386 | |
229 UN 216 . NC_001416 43388 43391 | |
230 UN 217 . NC_001416 43393 43397 | |
231 UN 218 . NC_001416 43399 43399 | |
232 UN 219 . NC_001416 43401 43402 | |
233 UN 220 . NC_001416 43405 43410 | |
234 UN 221 . NC_001416 43413 43458 | |
235 UN 222 . NC_001416 43460 43460 | |
236 UN 223 . NC_001416 43463 43463 | |
237 UN 224 . NC_001416 43465 43465 | |
238 UN 225 . NC_001416 43518 43519 | |
239 UN 226 . NC_001416 43526 43526 | |
240 UN 227 . NC_001416 43528 43528 | |
241 UN 228 . NC_001416 43560 43564 | |
242 UN 229 . NC_001416 43569 43569 | |
243 UN 230 . NC_001416 43575 43611 | |
244 UN 231 . NC_001416 43614 43629 | |
245 UN 232 . NC_001416 43634 43634 | |
246 UN 233 . NC_001416 43665 43665 | |
247 UN 234 . NC_001416 43678 43678 | |
248 UN 235 . NC_001416 43684 43685 | |
249 UN 236 . NC_001416 43691 43691 | |
250 UN 237 . NC_001416 43694 43697 | |
251 UN 238 . NC_001416 43699 43752 | |
252 UN 239 . NC_001416 43754 43754 | |
253 UN 240 . NC_001416 43757 43758 | |
254 UN 241 . NC_001416 43764 43764 | |
255 UN 242 . NC_001416 43798 43825 | |
256 UN 243 . NC_001416 43827 43834 | |
257 UN 244 . NC_001416 43836 43839 | |
258 UN 245 . NC_001416 43841 43841 | |
259 UN 246 . NC_001416 43845 43847 | |
260 UN 247 . NC_001416 43849 43849 | |
261 UN 248 . NC_001416 43851 43852 | |
262 UN 249 . NC_001416 43872 43879 | |
263 UN 250 . NC_001416 43901 43903 | |
264 UN 251 . NC_001416 44045 44045 | |
265 UN 252 . NC_001416 44047 44096 | |
266 UN 253 . NC_001416 44098 44098 | |
267 UN 254 . NC_001416 44100 44101 | |
268 UN 255 . NC_001416 44130 44130 | |
269 UN 256 . NC_001416 44132 44133 | |
270 UN 257 . NC_001416 44140 44157 | |
271 UN 258 . NC_001416 44182 44185 | |
272 UN 259 . NC_001416 44187 44187 | |
273 UN 260 . NC_001416 44194 44194 | |
274 UN 261 . NC_001416 44196 44197 | |
275 UN 262 . NC_001416 44200 44315 | |
276 UN 263 . NC_001416 44320 44338 | |
277 UN 264 . NC_001416 44383 44383 | |
278 UN 265 . NC_001416 44386 44396 | |
279 UN 266 . NC_001416 44399 44413 | |
280 UN 267 . NC_001416 44415 44415 | |
281 UN 268 . NC_001416 44421 44423 | |
282 UN 269 . NC_001416 44425 44425 | |
283 UN 270 . NC_001416 44445 44445 | |
284 UN 271 . NC_001416 44459 44461 | |
285 UN 272 . NC_001416 44576 44576 | |
286 UN 273 . NC_001416 44578 44670 | |
287 UN 274 . NC_001416 44674 44674 | |
288 UN 275 . NC_001416 44702 44703 | |
289 UN 276 . NC_001416 44759 44759 | |
290 UN 277 . NC_001416 44761 44763 | |
291 UN 278 . NC_001416 44775 44775 | |
292 UN 279 . NC_001416 44777 44777 | |
293 UN 280 . NC_001416 44779 44779 | |
294 UN 281 . NC_001416 44782 44783 | |
295 UN 282 . NC_001416 44786 44786 | |
296 UN 283 . NC_001416 44788 44790 | |
297 UN 284 . NC_001416 44803 44803 | |
298 UN 285 . NC_001416 44815 44815 | |
299 UN 286 . NC_001416 44837 44884 | |
300 UN 287 . NC_001416 44892 44892 | |
301 UN 288 . NC_001416 44948 44949 | |
302 UN 289 . NC_001416 44955 44955 | |
303 UN 290 . NC_001416 44957 44957 | |
304 UN 291 . NC_001416 44963 44963 | |
305 UN 292 . NC_001416 44965 44965 | |
306 UN 293 . NC_001416 44967 44968 | |
307 UN 294 . NC_001416 44975 44975 | |
308 UN 295 . NC_001416 44977 44983 | |
309 UN 296 . NC_001416 44987 44987 | |
310 UN 297 . NC_001416 45108 45108 | |
311 UN 298 . NC_001416 45148 45148 | |
312 UN 299 . NC_001416 45150 45153 | |
313 UN 300 . NC_001416 45157 45160 | |
314 UN 301 . NC_001416 45163 45163 | |
315 UN 302 . NC_001416 45165 45169 | |
316 UN 303 . NC_001416 45173 45173 | |
317 UN 304 . NC_001416 45175 45189 | |
318 UN 305 . NC_001416 45241 45242 | |
319 UN 306 . NC_001416 45245 45245 | |
320 UN 307 . NC_001416 45248 45252 | |
321 UN 308 . NC_001416 45259 45262 | |
322 UN 309 . NC_001416 45265 45266 | |
323 UN 310 . NC_001416 45268 45275 | |
324 UN 311 . NC_001416 45278 45281 | |
325 UN 312 . NC_001416 45290 45290 | |
326 UN 313 . NC_001416 45292 45294 | |
327 UN 314 . NC_001416 45296 45309 | |
328 UN 315 . NC_001416 45329 45329 | |
329 UN 316 . NC_001416 45335 45335 | |
330 UN 317 . NC_001416 45337 45337 | |
331 UN 318 . NC_001416 45339 45340 | |
332 UN 319 . NC_001416 45346 45346 | |
333 UN 320 . NC_001416 45355 45355 | |
334 UN 321 . NC_001416 45358 45372 | |
335 UN 322 . NC_001416 45378 45378 | |
336 UN 323 . NC_001416 45530 45533 | |
337 UN 324 . NC_001416 45542 45542 | |
338 UN 325 . NC_001416 45545 45545 | |
339 UN 326 . NC_001416 45547 45550 | |
340 UN 327 . NC_001416 45552 45552 | |
341 UN 328 . NC_001416 45556 45600 | |
342 UN 329 . NC_001416 45604 45604 | |
343 UN 330 . NC_001416 45638 45638 | |
344 UN 331 . NC_001416 45641 45641 | |
345 UN 332 . NC_001416 45643 45672 | |
346 UN 333 . NC_001416 45681 45684 | |
347 UN 334 . NC_001416 45687 45687 | |
348 UN 335 . NC_001416 45690 45690 | |
349 UN 336 . NC_001416 45694 45695 | |
350 UN 337 . NC_001416 45704 45754 | |
351 UN 338 . NC_001416 45759 45760 | |
352 UN 339 . NC_001416 45809 45809 | |
353 UN 340 . NC_001416 45812 45843 | |
354 UN 341 . NC_001416 45847 45847 | |
355 UN 342 . NC_001416 45851 45852 | |
356 UN 343 . NC_001416 45854 45854 | |
357 UN 344 . NC_001416 45856 45858 | |
358 UN 345 . NC_001416 45860 45860 | |
359 UN 346 . NC_001416 45924 45925 | |
360 UN 347 . NC_001416 45937 45940 | |
361 UN 348 . NC_001416 45942 45942 | |
362 UN 349 . NC_001416 45944 45944 | |
363 UN 350 . NC_001416 45948 45948 | |
364 UN 351 . NC_001416 45950 45978 | |
365 UN 352 . NC_001416 45981 45983 | |
366 UN 353 . NC_001416 45985 45986 | |
367 UN 354 . NC_001416 45988 45993 | |
368 UN 355 . NC_001416 45995 45995 | |
369 UN 356 . NC_001416 46113 46113 | |
370 UN 357 . NC_001416 46199 46201 | |
371 UN 358 . NC_001416 46205 46210 | |
372 UN 359 . NC_001416 46212 46224 | |
373 UN 360 . NC_001416 46231 46241 | |
374 UN 361 . NC_001416 46244 46245 | |
375 UN 362 . NC_001416 46247 46247 | |
376 UN 363 . NC_001416 46250 46250 | |
377 UN 364 . NC_001416 46253 46297 | |
378 UN 365 . NC_001416 46319 46320 | |
379 UN 366 . NC_001416 46322 46323 | |
380 UN 367 . NC_001416 46325 46408 | |
381 UN 368 . NC_001416 46415 46415 | |
382 UN 369 . NC_001416 46418 46418 | |
383 UN 370 . NC_001416 46422 46446 | |
384 UN 371 . NC_001416 46459 46460 | |
385 UN 372 . NC_001416 46462 46462 | |
386 UN 373 . NC_001416 46496 46496 | |
387 UN 374 . NC_001416 46498 46498 | |
388 UN 375 . NC_001416 46500 46504 | |
389 UN 376 . NC_001416 46506 46506 | |
390 UN 377 . NC_001416 46508 46553 | |
391 UN 378 . NC_001416 46555 46555 | |
392 UN 379 . NC_001416 46559 46559 | |
393 UN 380 . NC_001416 46563 46566 | |
394 UN 381 . NC_001416 46568 46570 | |
395 UN 382 . NC_001416 46572 46572 | |
396 UN 383 . NC_001416 46576 46576 | |
397 UN 384 . NC_001416 46578 46578 | |
398 UN 385 . NC_001416 46581 46581 | |
399 UN 386 . NC_001416 46584 46586 | |
400 UN 387 . NC_001416 46588 46590 | |
401 UN 388 . NC_001416 46592 46594 | |
402 UN 389 . NC_001416 46597 46610 | |
403 UN 390 . NC_001416 46613 46614 | |
404 UN 391 . NC_001416 46621 46621 | |
405 UN 392 . NC_001416 46623 46687 | |
406 UN 393 . NC_001416 46689 46689 | |
407 UN 394 . NC_001416 46692 46693 | |
408 UN 395 . NC_001416 46696 46736 | |
409 UN 396 . NC_001416 46740 46740 | |
410 UN 397 . NC_001416 46794 46794 | |
411 UN 398 . NC_001416 46845 46845 | |
412 UN 399 . NC_001416 46847 46857 | |
413 UN 400 . NC_001416 46859 46859 | |
414 UN 401 . NC_001416 46861 46862 | |
415 UN 402 . NC_001416 46864 46864 | |
416 UN 403 . NC_001416 46869 46870 | |
417 UN 404 . NC_001416 46874 46895 | |
418 UN 405 . NC_001416 46899 46931 | |
419 UN 406 . NC_001416 46944 46947 | |
420 UN 407 . NC_001416 46952 46952 | |
421 UN 408 . NC_001416 46974 46974 | |
422 UN 409 . NC_001416 46976 46980 | |
423 UN 410 . NC_001416 47061 47061 | |
424 UN 411 . NC_001416 47065 47065 | |
425 UN 412 . NC_001416 47126 47126 | |
426 UN 413 . NC_001416 47131 47146 | |
427 UN 414 . NC_001416 47153 47153 | |
428 UN 415 . NC_001416 47224 47246 | |
429 UN 416 . NC_001416 47248 47253 | |
430 UN 417 . NC_001416 47264 47264 | |
431 UN 418 . NC_001416 47369 47369 | |
432 UN 419 . NC_001416 47477 47478 | |
433 UN 420 . NC_001416 47480 47511 | |
434 UN 421 . NC_001416 47516 47516 | |
435 UN 422 . NC_001416 47519 47519 | |
436 UN 423 . NC_001416 47521 47521 | |
437 UN 424 . NC_001416 47523 47523 | |
438 UN 425 . NC_001416 47532 47532 | |
439 UN 426 . NC_001416 47537 47585 | |
440 UN 427 . NC_001416 47588 47589 | |
441 UN 428 . NC_001416 47591 47593 | |
442 UN 429 . NC_001416 47595 47596 | |
443 UN 430 . NC_001416 47605 47606 | |
444 UN 431 . NC_001416 47609 47623 | |
445 UN 432 . NC_001416 47625 47627 | |
446 UN 433 . NC_001416 47629 47629 | |
447 UN 434 . NC_001416 47631 47638 | |
448 UN 435 . NC_001416 47643 47656 | |
449 UN 436 . NC_001416 47714 47714 | |
450 UN 437 . NC_001416 47720 47726 | |
451 UN 438 . NC_001416 47728 47728 | |
452 UN 439 . NC_001416 47730 47743 | |
453 UN 440 . NC_001416 47753 47858 | |
454 UN 441 . NC_001416 47869 47869 | |
455 UN 442 . NC_001416 47885 47886 | |
456 UN 443 . NC_001416 47890 47893 | |
457 UN 444 . NC_001416 47895 47896 | |
458 UN 445 . NC_001416 47902 47903 | |
459 UN 446 . NC_001416 47910 47916 | |
460 UN 447 . NC_001416 47924 47924 | |
461 UN 448 . NC_001416 47928 47928 | |
462 UN 449 . NC_001416 48002 48019 | |
463 UN 450 . NC_001416 48021 48021 | |
464 UN 451 . NC_001416 48025 48025 | |
465 UN 452 . NC_001416 48055 48055 | |
466 UN 453 . NC_001416 48074 48074 | |
467 UN 454 . NC_001416 48081 48102 | |
468 UN 455 . NC_001416 48104 48104 | |
469 UN 456 . NC_001416 48106 48121 | |
470 UN 457 . NC_001416 48123 48123 | |
471 UN 458 . NC_001416 48126 48126 | |
472 UN 459 . NC_001416 48128 48128 | |
473 UN 460 . NC_001416 48131 48160 | |
474 UN 461 . NC_001416 48163 48164 | |
475 UN 462 . NC_001416 48166 48167 | |
476 UN 463 . NC_001416 48170 48171 | |
477 UN 464 . NC_001416 48173 48175 | |
478 UN 465 . NC_001416 48202 48202 | |
479 UN 466 . NC_001416 48204 48212 | |
480 UN 467 . NC_001416 48215 48216 | |
481 UN 468 . NC_001416 48219 48219 | |
482 UN 469 . NC_001416 48221 48221 | |
483 UN 470 . NC_001416 48224 48233 | |
484 UN 471 . NC_001416 48299 48326 | |
485 UN 472 . NC_001416 48328 48328 | |
486 UN 473 . NC_001416 48423 48425 | |
487 UN 474 . NC_001416 48463 48463 | |
488 UN 475 . NC_001416 48468 48469 | |
489 UN 476 . NC_001416 48471 48502 |