Mercurial > repos > iuc > breseq

diff test-data/report.html @ 3:0d18a3ba2d1c draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit 6e869b3e13ed7b012b270f14fce812613642e5f2"
author iuc
date Mon, 04 Apr 2022 08:30:52 +0000
parents 82fb5e3bb93e
children
line wrap: on
line diff
--- a/test-data/report.html	Wed Apr 07 12:17:45 2021 +0000
+++ b/test-data/report.html	Mon Apr 04 08:30:52 2022 +0000
@@ -81,7 +81,7 @@
 
 <!-- Print The Table Row -->
 <tr class="normal_table_row">
-<td align="center"><a href="evidence/JC_11.html">JC</a></td><!-- Evidence -->
+<td align="center"><a href="evidence/JC_9.html">JC</a></td><!-- Evidence -->
 <td align="right">41,405</td><!-- Position -->
 <td align="center">(GCG)<sub>2&rarr;5</sub></td><!-- Cell Mutation -->
 <td align="center">coding&nbsp;(325/873&nbsp;nt)</td>
@@ -92,7 +92,7 @@
 
 <!-- Print The Table Row -->
 <tr class="normal_table_row">
-<td align="center"><a href="evidence/MC_PLOT_8.html">MC</a>&nbsp;<a href="evidence/JC_12.html">JC</a></td><!-- Evidence -->
+<td align="center"><a href="evidence/MC_PLOT_6.html">MC</a>&nbsp;<a href="evidence/JC_10.html">JC</a></td><!-- Evidence -->
 <td align="right">41,601</td><!-- Position -->
 <td align="center">(AAC)<sub>2&rarr;1</sub></td><!-- Cell Mutation -->
 <td align="center">coding&nbsp;(521&#8209;523/873&nbsp;nt)</td>
@@ -103,29 +103,7 @@
 
 <!-- Print The Table Row -->
 <tr class="normal_table_row">
-<td align="center"><a href="evidence/JC_13.html">JC</a></td><!-- Evidence -->
-<td align="right">41,716</td><!-- Position -->
-<td align="center">(T)<sub>5&rarr;9</sub></td><!-- Cell Mutation -->
-<td align="center">coding&nbsp;(636/873&nbsp;nt)</td>
-<td align="center"><i>NinC</i>&nbsp;&rarr;</td>
-<td align="left">NinC protein</td>
-</tr>
-<!-- End Table Row -->
-
-<!-- Print The Table Row -->
-<tr class="normal_table_row">
-<td align="center"><a href="evidence/MC_PLOT_9.html">MC</a>&nbsp;<a href="evidence/JC_14.html">JC</a></td><!-- Evidence -->
-<td align="right">44,075</td><!-- Position -->
-<td align="center">(CAAA)<sub>2&rarr;1</sub></td><!-- Cell Mutation -->
-<td align="center">coding&nbsp;(190&#8209;193/624&nbsp;nt)</td>
-<td align="center"><i>Q</i>&nbsp;&rarr;</td>
-<td align="left">late gene regulator</td>
-</tr>
-<!-- End Table Row -->
-
-<!-- Print The Table Row -->
-<tr class="normal_table_row">
-<td align="center"><a href="evidence/SNP_5.html">RA</a></td><!-- Evidence -->
+<td align="center"><a href="evidence/SNP_3.html">RA</a></td><!-- Evidence -->
 <td align="right">47,317</td><!-- Position -->
 <td align="center">N&rarr;T</td><!-- Cell Mutation -->
 <td align="center"><span style="white-space: nowrap"><font class="snp_type_nonsynonymous">?87I</font>&nbsp;(<font class="mutation_in_codon">N</font>TC&rarr;<font class="mutation_in_codon">A</font>TC)&nbsp;</span></td>
@@ -147,27 +125,40 @@
 <th width="100%">description</th>
 </tr>
 <tr>
+<td><a href="evidence/MC_SIDE_1_5.html">*</a></td>
+<td><a href="evidence/MC_SIDE_2_5.html">*</a></td>
+<td><a href="evidence/MC_PLOT_5.html">&divide;</a></td>
+<td>NC_001416</td>
+<td align="right">1</td>
+<td align="right">38811</td>
+<td align="right">38811</td>
+<td align="center">NA&nbsp;[0]</td>
+<td align="center">[1]&nbsp;2</td>
+<td align="center"><i>nu1&#8211;[O]</i></td>
+<td align="left">nu1,A,W,B,C,nu3,D,E,Fi,Fii,Z,U,V,G,T,H,M,L,K,I,J,lom,orf&#8209;401,orf206b,orf&#8209;314,orf&#8209;194,ea47,ea31,ea59,int,xis,lambdap35,ea8.5,ea22,orf61,orf63,orf60a,exo,bet,gam,kil,cIII,ea10,ral,orf28,lambdap48,N,rexb,rexa,cI,cro,cII,[O]</td>
+</tr>
+<tr>
 <td><a href="evidence/MC_SIDE_1_7.html">*</a></td>
 <td><a href="evidence/MC_SIDE_2_7.html">*</a></td>
 <td><a href="evidence/MC_PLOT_7.html">&divide;</a></td>
 <td>NC_001416</td>
-<td align="right">1</td>
-<td align="right">38810</td>
-<td align="right">38810</td>
-<td align="center">NA&nbsp;[0]</td>
-<td align="center">[10]&nbsp;13</td>
-<td align="center"><i>nu1&#8211;[O]</i></td>
-<td align="left">nu1,A,W,B,C,nu3,D,E,Fi,Fii,Z,U,V,G,T,H,M,L,K,I,J,lom,orf&#8209;401,orf206b,orf&#8209;314,orf&#8209;194,ea47,ea31,ea59,int,xis,lambdap35,ea8.5,ea22,orf61,orf63,orf60a,exo,bet,gam,kil,cIII,ea10,ral,orf28,lambdap48,N,rexb,rexa,cI,cro,cII,[O]</td>
+<td align="right">48305</td>
+<td align="right">48312</td>
+<td align="right">8</td>
+<td align="center">2&nbsp;[1]</td>
+<td align="center">[1]&nbsp;2</td>
+<td align="center"><i>lambdap79/&#8211;</i></td>
+<td align="left">hypothetical protein/&#8211;</td>
 </tr>
 <tr>
-<td><a href="evidence/MC_SIDE_1_10.html">*</a></td>
-<td><a href="evidence/MC_SIDE_2_10.html">*</a></td>
-<td><a href="evidence/MC_PLOT_10.html">&divide;</a></td>
+<td><a href="evidence/MC_SIDE_1_8.html">*</a></td>
+<td><a href="evidence/MC_SIDE_2_8.html">*</a></td>
+<td><a href="evidence/MC_PLOT_8.html">&divide;</a></td>
 <td>NC_001416</td>
-<td align="right">48475</td>
+<td align="right">48485</td>
 <td align="right">48502</td>
-<td align="right">28</td>
-<td align="center">12&nbsp;[10]</td>
+<td align="right">18</td>
+<td align="center">2&nbsp;[1]</td>
 <td align="center">[0]&nbsp;NA</td>
 <td align="center"><i>lambdap79/&#8211;</i></td>
 <td align="left">hypothetical protein/&#8211;</td>