Mercurial > repos > iuc > busco
annotate test-data/genome_results/short_summary @ 1:87983967544b draft
planemo upload commit c8dc021bd99764eacaa17cbe4f44bcdacca00414
author | iuc |
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date | Tue, 24 Jan 2017 12:08:38 -0500 |
parents | 5e3543b1ef9f |
children | 382a4c19007f |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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1 # BUSCO version is: 2.0 |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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2 # The lineage dataset is: arthropoda (Creation date: N/A, number of species: N/A, number of BUSCOs: N/A) |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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3 # To reproduce this run: python /tmp/tmpeQaU9k/job_working_directory/000/2/conda-env/bin/BUSCO.py -i /tmp/tmpeQaU9k/files/000/dataset_1.dat -o busco_galaxy -l /home/abretaud/iuc_tools_abretaud/tools/busco/test-data/arthropoda/ -m genome -c 1 -sp generic -e 0.01 -z |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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4 # |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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5 # Summarized benchmarking in BUSCO notation for file /tmp/tmpeQaU9k/files/000/dataset_1.dat |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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6 # BUSCO was run in mode: genome |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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7 |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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8 C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:1 |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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9 |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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10 0 Complete BUSCOs (C) |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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11 0 Complete and single-copy BUSCOs (S) |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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12 0 Complete and duplicated BUSCOs (D) |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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13 0 Fragmented BUSCOs (F) |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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14 1 Missing BUSCOs (M) |
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planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
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15 1 Total BUSCO groups searched |