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annotate test-data/proteome_results/short_summary @ 1:87983967544b draft

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planemo upload commit c8dc021bd99764eacaa17cbe4f44bcdacca00414
author iuc
date Tue, 24 Jan 2017 12:08:38 -0500
parents 5e3543b1ef9f
children 382a4c19007f
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5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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1 # BUSCO version is: 2.0
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2 # The lineage dataset is: arthropoda (Creation date: N/A, number of species: N/A, number of BUSCOs: N/A)
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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3 # To reproduce this run: python /tmp/tmpCgx5rU/job_working_directory/000/4/conda-env/bin/BUSCO.py -i /tmp/tmpCgx5rU/files/000/dataset_5.dat -o busco_galaxy -l /home/abretaud/iuc_tools_abretaud/tools/busco/test-data/arthropoda/ -m proteins -c 1 -sp generic -e 0.01 -z
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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4 #
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5 # Summarized benchmarking in BUSCO notation for file /tmp/tmpCgx5rU/files/000/dataset_5.dat
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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6 # BUSCO was run in mode: proteins
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8 C:0.0%[S:0.0%,D:0.0%],F:100.0%,M:0.0%,n:1
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9
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10 0 Complete BUSCOs (C)
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11 0 Complete and single-copy BUSCOs (S)
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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12 0 Complete and duplicated BUSCOs (D)
5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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13 1 Fragmented BUSCOs (F)
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14 0 Missing BUSCOs (M)
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15 1 Total BUSCO groups searched