Mercurial > repos > iuc > busco
annotate test-data/genome_results/short_summary_cached @ 18:94170eee0ad8 draft
planemo upload commit 09dff03131fb917a00cc291580ed7c4f38b266c9
author | iuc |
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date | Fri, 14 Apr 2023 08:13:46 +0000 |
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children | 2a5b8b9936bf |
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planemo upload commit 09dff03131fb917a00cc291580ed7c4f38b266c9
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1 # BUSCO version is: 5.4.6 |
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2 # The lineage dataset is: archaea_odb10 (Creation date: 2021-02-23, number of genomes: 404, number of BUSCOs: 194) |
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3 # Summarized benchmarking in BUSCO notation for file /tmp/tmpte_du6dt/files/000/dataset_1.dat |
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4 # BUSCO was run in mode: prok_genome |
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5 # Gene predictor used: prodigal |
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6 |
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7 ***** Results: ***** |
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8 |
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9 C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:194 |
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planemo upload commit 09dff03131fb917a00cc291580ed7c4f38b266c9
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10 0 Complete BUSCOs (C) |
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11 0 Complete and single-copy BUSCOs (S) |
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12 0 Complete and duplicated BUSCOs (D) |
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13 0 Fragmented BUSCOs (F) |
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14 194 Missing BUSCOs (M) |
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15 194 Total BUSCO groups searched |
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16 |
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17 Assembly Statistics: |
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18 1 Number of scaffolds |
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19 1 Number of contigs |
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20 62370 Total length |
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21 0.000% Percent gaps |
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22 62 KB Scaffold N50 |
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23 62 KB Contigs N50 |
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24 |
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25 |
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26 Dependencies and versions: |
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27 hmmsearch: 3.1 |
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28 bbtools: 39.01 |
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29 prodigal: 2.6.3 |
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30 busco: 5.4.6 |