Mercurial > repos > iuc > busco
diff test-data/transcriptome_results/short_summary @ 7:4048d82f0c88 draft
"planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
author | iuc |
---|---|
date | Mon, 17 Aug 2020 06:50:18 -0400 |
parents | 382a4c19007f |
children | 602fb8e63aa7 |
line wrap: on
line diff
--- a/test-data/transcriptome_results/short_summary Wed Dec 04 13:45:35 2019 -0500 +++ b/test-data/transcriptome_results/short_summary Mon Aug 17 06:50:18 2020 -0400 @@ -1,15 +1,14 @@ -# BUSCO version is: 3.0.2 -# The lineage dataset is: N/A (Creation date: N/A, number of species: N/A, number of BUSCOs: N/A) -# To reproduce this run: python /tmp/tmpCgx5rU/job_working_directory/000/6/conda-env/bin/BUSCO.py -i /tmp/tmpCgx5rU/files/000/dataset_9.dat -o busco_galaxy -l /home/abretaud/iuc_tools_abretaud/tools/busco/test-data/arthropoda/ -m tran -c 1 -sp generic -e 0.01 -z -# -# Summarized benchmarking in BUSCO notation for file /tmp/tmpCgx5rU/files/000/dataset_9.dat +# BUSCO version is: 4.1.2 +# The lineage dataset is: arthropoda_odb10 (Creation date: 2019-11-20, number of species: 90, number of BUSCOs: 1013) +# Summarized benchmarking in BUSCO notation for file /tmp/tmpsafr8yho/files/9/9/2/dataset_9922e6bd-50c2-4b64-8e36-70b9b9c3f8ed.dat # BUSCO was run in mode: transcriptome - C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:1 + ***** Results: ***** - 0 Complete BUSCOs (C) - 0 Complete and single-copy BUSCOs (S) - 0 Complete and duplicated BUSCOs (D) - 0 Fragmented BUSCOs (F) - 1 Missing BUSCOs (M) - 1 Total BUSCO groups searched + C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013 + 1 Complete BUSCOs (C) + 1 Complete and single-copy BUSCOs (S) + 0 Complete and duplicated BUSCOs (D) + 0 Fragmented BUSCOs (F) + 1012 Missing BUSCOs (M) + 1013 Total BUSCO groups searched