Mercurial > repos > iuc > busco
diff test-data/genome_results_metaeuk/short_summary @ 20:ea8146ee148f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
| author | iuc |
|---|---|
| date | Mon, 18 Mar 2024 16:01:49 +0000 |
| parents | 2a5b8b9936bf |
| children | 2babe6d5c561 |
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--- a/test-data/genome_results_metaeuk/short_summary Tue Nov 14 13:03:37 2023 +0000 +++ b/test-data/genome_results_metaeuk/short_summary Mon Mar 18 16:01:49 2024 +0000 @@ -1,30 +1,30 @@ -# BUSCO version is: 5.5.0 -# The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013) -# Summarized benchmarking in BUSCO notation for file /tmp/tmp5_syjrgy/files/1/d/2/dataset_1d20a949-adce-4511-8cab-345d59a61a05.dat +# BUSCO version is: 5\.5\.0 +# The lineage dataset is: arthropoda_odb10 \(Creation date: [0-9]{4}-[0-9]{2}-[0-9]{2}, number of genomes: 90, number of BUSCOs: 1013\) +# Summarized benchmarking in BUSCO notation for file [a-z0-9_\-/\.]+ # BUSCO was run in mode: euk_genome_met # Gene predictor used: metaeuk - ***** Results: ***** + \*\*\*\*\* Results: \*\*\*\*\* - C:0.2%[S:0.2%,D:0.0%],F:0.0%,M:99.8%,n:1013 - 2 Complete BUSCOs (C) - 2 Complete and single-copy BUSCOs (S) - 0 Complete and duplicated BUSCOs (D) - 0 Fragmented BUSCOs (F) - 1011 Missing BUSCOs (M) + C:0\.2%\[S:0\.2%,D:0\.0%\],F:0\.0%,M:99\.8%,n:1013 + 2 Complete BUSCOs \(C\) + 2 Complete and single-copy BUSCOs \(S\) + 0 Complete and duplicated BUSCOs \(D\) + 0 Fragmented BUSCOs \(F\) + 1011 Missing BUSCOs \(M\) 1013 Total BUSCO groups searched Assembly Statistics: 1 Number of scaffolds 1 Number of contigs 62370 Total length - 0.000% Percent gaps + 0\.000% Percent gaps 62 KB Scaffold N50 62 KB Contigs N50 Dependencies and versions: - hmmsearch: 3.1 - bbtools: 39.01 - metaeuk: 6.a5d39d9 - busco: 5.5.0 + hmmsearch: [0-9\.\+]+ + bbtools: [0-9\.\+]+ + metaeuk: [0-9a-z\.\+]+ + busco: [0-9\.\+]+